Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1636 ATGTCTGCAAGGAATGAACACCATACCGTTCCCCTTTCGGTGCTTCTGAAGCGCGAATTGGCAAACGAGAAAATTGAGAAACCAGAAATTGTGCATGGTCAAGCTAGCCAGAGCAAAAAAGGCGAAGATTTCACGCTAATAAAGACGGAATGCCAAAGGGTGGCGGGAGATGGGGTGTCTACGTATTCTGTTTTTGGGCTATTTGACGGGCACAATGGATCTGATGCTGCGATCTATGCCAAGGAGAATCTCTTAAATAATGTTTTAAGTGCGGTTCCCCCAGATCTTAATAGAGAGGAGTGGGTGTCAGCATTGCCTAGGGCTTTGGTTGCAGGCTTTGTCAAAACTGATAAAGAGTTTCAAGAGAAAAGACAAAAATCAGGAACAACAGTAACCTTTGTGATTATTGAAGGATGGGTTGTTACAGTTGCATCGGTTGGTGATTCCCGTTGCATACTTGAGCCTTCTGAAGGTGGGATGTATTACTTGTCAGCAGATCATAGGCTAGATACTAATGAAGAGGAGAGGGAGCGTATAACTGCTAGCGGGGGTGAGGTTGCTCGTCTAAATACTGGCGGAGGTGCACAGGTTGGTCCTTTGAGGTGTTGGCCTGGAGGCTTGTGTCTTTCAAGATCCATTGGTGATATGGATGTTGGTGAATATGTTGTCCCCGTACCTCATGTGAAGCAAGTGAAGCTGTCCACTGCTGGAGGCAGGCTTATTATCTGCAGTGATGGTGTTTGGGATTCTTTGACTGCAGAAGCAGCCCTTGATTGTTGTCGTGGCATGACAGCAGATGCTGCAGCATCCCTTCTTGTTAGAGAAGCTTTGCAACCGAAGGGACTTAGAGATGATACTACCTGCATCATTGTTGATATATTATCTCAGGAGAAGCCACTTGCTCCTGTGCAACAACCAAAAAAGACAGGGAAAATGTTTAAGGCAATGTTTCGCAAAAAGTCTTCCGAATCATCTTCTTGTAATGACAAAGAGTGCCTGGAACCAGATGTGGTAGAGGAACTGTTCGAGGAAGGATCTGCTAAGCTTGCAGAGAGGTTAGATACAAAATACCCTCTCTGCAACATGTTCAAGTTGTTTGTTTGTGCGGTATGTCAAGAGGAGATCAAACCTGGAGAGGGTATTTCAATTCATGCAGGTGTATCCAACCCAGGGAAATTGCGTCCCTGGGATGGACCTTTTCTTTGTTCAAGTTGCCAGGTGAAGAAAGAAGCAATGGAAGGAAAAAGAAAATCAGATAATAGAGTGAGCAGGGGATATAATGGAGTGAGCAATGGAAGTGACTGA 1305 0.4506 MSARNEHHTVPLSVLLKRELANEKIEKPEIVHGQASQSKKGEDFTLIKTECQRVAGDGVSTYSVFGLFDGHNGSDAAIYAKENLLNNVLSAVPPDLNREEWVSALPRALVAGFVKTDKEFQEKRQKSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGMYYLSADHRLDTNEEERERITASGGEVARLNTGGGAQVGPLRCWPGGLCLSRSIGDMDVGEYVVPVPHVKQVKLSTAGGRLIICSDGVWDSLTAEAALDCCRGMTADAAASLLVREALQPKGLRDDTTCIIVDILSQEKPLAPVQQPKKTGKMFKAMFRKKSSESSSCNDKECLEPDVVEELFEEGSAKLAERLDTKYPLCNMFKLFVCAVCQEEIKPGEGISIHAGVSNPGKLRPWDGPFLCSSCQVKKEAMEGKRKSDNRVSRGYNGVSNGSD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1636 434 CDD PP2Cc 39 293 IPR001932 -
Mibi08g1636 434 Gene3D - 31 300 IPR036457 -
Mibi08g1636 434 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Mibi08g1636 434 PANTHER PROTEIN PHOSPHATASE 32 292 - -
Mibi08g1636 434 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Mibi08g1636 434 SMART PP2C_4 21 291 IPR001932 -
Mibi08g1636 434 MobiDBLite consensus disorder prediction 410 434 - -
Mibi08g1636 434 Pfam Protein phosphatase 2C 54 279 IPR001932 -
Mibi08g1636 434 SMART PP2C_SIG_2 54 293 IPR001932 -
Mibi08g1636 434 FunFam probable protein phosphatase 2C 12 32 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1636 Mibi-ChrMibi08 32929191 32933919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1636 1 423 PP2C-type Phosphatase Gene Family AT1G47380 76.887 0.0 692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1636 08 32929191 32933919 Mibi05g1010 05 12509084 12514000 CCT
Mibi08g1636 08 32929191 32933919 Mibi08g1636 08 32929191 32933919 ECH