Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1626 ATGGGCAAGGAAAAGGACAAGTTGATAACTTTATCAGCAGCCTTCTTCATCGGGGCAATTTTTGTGTGTGTTATAGCCGAGCCAGTGGAAGATAAAAAAGCTTTGCTTGATTTCTACCGCACTATTGATCAGTCTCATCCTCTGAACTGGGATGAGAATTCTTCTGCATGCACAAGCTGGAGAGGAGTTTTCTGCAATAATGAACAATCCAGAGTCATAGCCCTCCGTTTACCTGGAGCTGGATTGAGTGGTCCAATCCCATCCAACACTCTAAGTCGTCTCACAGAACTTCAAACTTTGAGCCTTAGATCCAACAGAATAACGGGTTCTTTTCCTTCTGATTTCTCTGAGCTGAAAAATTTGAGCTATGTTCATCTCCAATTCAACAACTTTTCTGGTCCATTACCATCGGATTTTTCTGTTTGGAAGAATCTTAATGTTATTGAGTTGTCCAATAATTCTTTCAATGGAAGCATTCCTTCTTCCATTGGGAAATTGACTCATCTCACATCTTTAGTCTTAGCCAACAACTCGCTTTCAGGTGAAATTCCTGACATCGATATTCCTAGCCTTAAACAGCTCAATTTAGCCAATAACCATCTTAGTGGGGTTGTGCCTAAATCCCTTGAGAGATTTCCAGGTTCAGCTTTTGCTGGTAATAACAATCTCACAACAGAAAATTCACTTCCTCCAGCTATTCCACTTCAACCACCAAATGCTCCTCCAAAAAAGAAAACCACACTAAGCGAGCCTGTATTGTTGGCTATCATCATTGGTGGTTGTGTGCTGTTATTTCTGGCGATTGCAGCTTTCATGCTTCTCCGCAGCTATCAGAATAATGGAGATGAACAAGTGCCACCAGTAAAATCAAAGAAAAAAGAAGACTCACTGAAGAAAGAAGTGTCTGAAACTGAAAGTCAAGACAAGAACAAGATTGTGTTCTTTGAGGGTCGCCATCTTGCCTTTGACCTGGAAGACCTGTTGAGATCATCTGCTGAGGTACTAGGAAAAGGAAGCTTCGGGACAACGTATAAGGCTGCTCTAGACGATGTAACCACGGTGGTGGTGAAGAGGTTGAAAGACGTGGTGGTCGGAAAACGCGAGTTTGAACAGCAGATGGAGGTGGTGGGAAGGATTAGGCATGATAATGTGGTTCCACTAAGGGCATATTACTATTCTAAGGAAGAGAAACTTATGGTGTGTGATCACTTCGAACAGGGTAGCGTTTCTGCAATGTTACATGGTAGAAAAGGGGAAGGCAGGGCTTCTTTAGATTGGGATAGCCGGATGAGAATTGCAATAGGTGCAGCAAGAGGGATGGCTCACATCCACGCACAACTTGGAGGGAAACTAGTACATGGCAACCTAAAAGCCTCAAACATTTTCTTAAACTCTCAAGGATATGGTTGTGTATCTGATGCAGGTTTGGCCACATTAACAAGTTCAATGCCCTTACCAGCACAGAGAACTGGAGGGTACCGTGCACCAGAGGTAACAGACACCAGGAAAGTGAGCCATGCGGCTGACGTGTACAGTTTTGGGGTGCTGGTGCTTGAGCTTCTGACCGGTAAATCGCCCATACATGCCACAGGGAGTGAGGAGGTGGTGCATCTGGTGAGGTGGGTGAATTCCGTGGTGAGAGAGGAGTGGACGGCAGAAGTGTTTGATGTTGAGTTGCTGAGATATTCAAATATTGAGGAAGAAATGGTGGAGATGTTGCAGATAGGGATGGCATGTGTGGTGAGGGTGCCGGAACGAAGACCGAAGATGCAAGATGTTGTGAGAATGTTGGAGGAAGTTCGTAAAGTGAATACAGGAACCCAATCATCCACAGAAGGTTCCACCCCAACCCCACAAGCAATTATTGATGCACCTTCTTCATCTGCTCCACAATAA 1896 0.4446 MGKEKDKLITLSAAFFIGAIFVCVIAEPVEDKKALLDFYRTIDQSHPLNWDENSSACTSWRGVFCNNEQSRVIALRLPGAGLSGPIPSNTLSRLTELQTLSLRSNRITGSFPSDFSELKNLSYVHLQFNNFSGPLPSDFSVWKNLNVIELSNNSFNGSIPSSIGKLTHLTSLVLANNSLSGEIPDIDIPSLKQLNLANNHLSGVVPKSLERFPGSAFAGNNNLTTENSLPPAIPLQPPNAPPKKKTTLSEPVLLAIIIGGCVLLFLAIAAFMLLRSYQNNGDEQVPPVKSKKKEDSLKKEVSETESQDKNKIVFFEGRHLAFDLEDLLRSSAEVLGKGSFGTTYKAALDDVTTVVVKRLKDVVVGKREFEQQMEVVGRIRHDNVVPLRAYYYSKEEKLMVCDHFEQGSVSAMLHGRKGEGRASLDWDSRMRIAIGAARGMAHIHAQLGGKLVHGNLKASNIFLNSQGYGCVSDAGLATLTSSMPLPAQRTGGYRAPEVTDTRKVSHAADVYSFGVLVLELLTGKSPIHATGSEEVVHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVEMLQIGMACVVRVPERRPKMQDVVRMLEEVRKVNTGTQSSTEGSTPTPQAIIDAPSSSAPQ 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1626 631 SUPERFAMILY Protein kinase-like (PK-like) 332 598 IPR011009 -
Mibi08g1626 631 ProSitePatterns Protein kinases ATP-binding region signature. 335 366 IPR017441 GO:0005524
Mibi08g1626 631 MobiDBLite consensus disorder prediction 220 244 - -
Mibi08g1626 631 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 404 611 - -
Mibi08g1626 631 Gene3D Ribonuclease Inhibitor 29 236 IPR032675 -
Mibi08g1626 631 FunFam pollen receptor-like kinase 1 298 403 - -
Mibi08g1626 631 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Mibi08g1626 631 ProSiteProfiles Protein kinase domain profile. 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1626 631 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Mibi08g1626 631 SUPERFAMILY L domain-like 42 212 - -
Mibi08g1626 631 Gene3D Transferase(Phosphotransferase) domain 1 404 617 - -
Mibi08g1626 631 MobiDBLite consensus disorder prediction 602 631 - -
Mibi08g1626 631 MobiDBLite consensus disorder prediction 281 303 - -
Mibi08g1626 631 Pfam Protein tyrosine and serine/threonine kinase 333 597 IPR001245 GO:0004672|GO:0006468
Mibi08g1626 631 PANTHER OS05G0588300 PROTEIN 17 610 - -
Mibi08g1626 631 MobiDBLite consensus disorder prediction 286 303 - -
Mibi08g1626 631 Gene3D Phosphorylase Kinase; domain 1 294 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1626 Mibi-ChrMibi08 32832760 32834740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1626 26 612 Receptor kinase-like Gene Family AT4G23740 56.146 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi08g1626 PK_Tyr_Ser-Thr 3e-32 CL0016