Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1621 ATGGAACAGAGTATCTTCTGCAAATACACTGTCCACCAAAGTGTCACCAAGAAATACACCAAACCAGTAGTCACCACAAACAACAAGCCCTCCAATCTTCACACTCCCGTAGAACCCAAAATCGTACGGATTTCCGTCACCGACCCAGACGCCACCGACTCATCCAGCGACGAAGAAGGAGAATACTGCTTTGCTCGTCAGAGAGTGAAGCGCTATGTCAACCAAGTCAACATCGAACCCACCAGTAAGAACTCGTTAACTTCCAATCCCAGAAAGAGGCTCGCCGGAGAAACCCAATCTCACCGCCGGCCGGCGAAGATTTCATCATCCACGAACACCGGTCGTAAATTCCGAGGTGTACGGCAGAGACCGTGGGGGAAATGGGCGGCTGAGATTAGAGATCCAGCTCGTCGTGTTCGCGTCTGGTTAGGAACGTTCGACACTGCAGAAGAAGCAGCCATGGTTTACGATAATGCAGCCATTAAGATTCGCGGACCAGACGCTTTAACTAACTTCGTTACCCCACCGAAGAAGAAGGATTCTCCTCCAGAAATCAATGTGGTGGTGAAACCAGAACCGTCGTCTGGATCTAGCTACGATTCCGGCGAGGAATCTCACCGCCGGCTACCTTCTCCGACGTCCGTACTGCTATACAGAAGCAATTCCAGCAGCGAATTGAACGAACCGCAGAAGAAAAGCGAACCGGAGAGAGAAAACGAGGCGGTTACGGAGGAAACCGGAGGGGAAGACTGTTGCTTAAGGGAGTGTGAAGGAGAAACGAGTAATTCGAAGTACTTGGGATTTGAAGTTCCACATGATGAGGATTTCTTTGGGTTGGAGATGCCTAATTGGGAGCAGGTGTTCGATTTCTCGACGCCGGAGCCGGAATACTCGTTACTGTTCGGGGAATCACCGGCGTTTTTGCCGGAGACAACGGCGGCGGAGGAAGATTTCAGGGTGGAGGACTTTTTGGTGGGTGAGGAAGAGATGGAGGTGGAGGAGTCGTTGAAAATGGAGGAATATTTTGAGGAGATTTTGTCGTGTTCGGAGCCACTGGTTGTGCTGTGA 1068 0.5103 MEQSIFCKYTVHQSVTKKYTKPVVTTNNKPSNLHTPVEPKIVRISVTDPDATDSSSDEEGEYCFARQRVKRYVNQVNIEPTSKNSLTSNPRKRLAGETQSHRRPAKISSSTNTGRKFRGVRQRPWGKWAAEIRDPARRVRVWLGTFDTAEEAAMVYDNAAIKIRGPDALTNFVTPPKKKDSPPEINVVVKPEPSSGSSYDSGEESHRRLPSPTSVLLYRSNSSSELNEPQKKSEPERENEAVTEETGGEDCCLRECEGETSNSKYLGFEVPHDEDFFGLEMPNWEQVFDFSTPEPEYSLLFGESPAFLPETTAAEEDFRVEDFLVGEEEMEVEESLKMEEYFEEILSCSEPLVVL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1621 355 Gene3D AP2/ERF domain 115 174 IPR036955 GO:0003700|GO:0006355
Mibi08g1621 355 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Mibi08g1621 355 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 271 - -
Mibi08g1621 355 MobiDBLite consensus disorder prediction 80 121 - -
Mibi08g1621 355 MobiDBLite consensus disorder prediction 172 249 - -
Mibi08g1621 355 MobiDBLite consensus disorder prediction 80 94 - -
Mibi08g1621 355 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Mibi08g1621 355 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Mibi08g1621 355 FunFam Ethylene-responsive transcription factor 2 115 174 - -
Mibi08g1621 355 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
Mibi08g1621 355 MobiDBLite consensus disorder prediction 102 117 - -
Mibi08g1621 355 MobiDBLite consensus disorder prediction 229 249 - -
Mibi08g1621 355 CDD AP2 116 172 IPR001471 GO:0003700|GO:0006355
Mibi08g1621 355 SUPERFAMILY DNA-binding domain 116 173 IPR016177 GO:0003677
Mibi08g1621 355 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Mibi08g1621 355 MobiDBLite consensus disorder prediction 214 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1621 Mibi-ChrMibi08 32782411 32783478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1621 7 336 AP2-EREBP Transcription Factor Family AT4G27950 38.329 2.52e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi08g1621 AP2 4.1e-14 CL0081