Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1617 ATGGAGAAGGTGATGAACATGGGAGAGTGGGAGAGAAGGCTCATCAATGAGCTAGTACAAGGTAGGGAGCTGGCTAGGAGACTCCAGACGTGCCTCAACGCGCCTTCTTCCTCCCAAGAAACTCGTGATTTCTTGATCCACAGTATCATTGCAGCATTTGAAAGGGCACTTGCTACGGTTAACTTCAATGGTGGGTCGTCGGCAGCTGACATGTCTCATCCAACTCGAATCGGAATCCCAACTTCTGAGTCACCTCCTTTTAGTGGTAGCCCTCGCAGCGAAGACTCTGACAGAGATTTCCAGGACCACAATAATGCCTCCAAAAAGAGAAGGGGCATGCCGAGGTGGACAAAACAGATTCAAGTTAACCCTAAAATGGGAGTGGAAGGCACTCTTGACGATGGATATAGCTGGAGAAAATATGGCCAGAAAGAGATTCTGGGTGCCAAGTTCCCTAGAGGCTATTACAGATGCACCCACAGAAATGTTCAGGGATGCTTGGCCACGAAGCAAGTGCAAAGATCTGACGAAGACCCCAATATATTTGAGATCACATACAGAGGAAAGCACACTTGTTCACAATCGTCCGCATCCAATGCGCTTCCTCTATCTGCCGCCCAAGAAACTCATGAACTAAATAATCCAATATCTGCAGATCCACAGGAACAACTACTTGTCAACCTTCGAGCTGGCCTGAGAGTCCAAACAGACAATCTAGATGTCCCCGAATCATCATTTACCTCTCTGCTTTTGAATCACCAAAACCAAATGTTTACGAGCTCCTCCATGTTGGAAAACAATTTTGCAGAAAACATTACTTCTTCTGATCCTTCCTATATGTGCCCTGCCACATCAGCCATTACCTACTTTTCAGTCAATGACATGTTTGGTGATATGCCAAACATGGCAACTTCTGGTTCTGAGATTAACGACACTATCTCAGCCGTTACCTCAGCCGCAAACTCCCCAACCGTTGGTTTAGATCTTCCATTTGATCACTTCGGATATGACGCACACAATTTCACCTTTGATAACCACCGTTTCTTCTAA 1050 0.46 MEKVMNMGEWERRLINELVQGRELARRLQTCLNAPSSSQETRDFLIHSIIAAFERALATVNFNGGSSAADMSHPTRIGIPTSESPPFSGSPRSEDSDRDFQDHNNASKKRRGMPRWTKQIQVNPKMGVEGTLDDGYSWRKYGQKEILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPNIFEITYRGKHTCSQSSASNALPLSAAQETHELNNPISADPQEQLLVNLRAGLRVQTDNLDVPESSFTSLLLNHQNQMFTSSSMLENNFAENITSSDPSYMCPATSAITYFSVNDMFGDMPNMATSGSEINDTISAVTSAANSPTVGLDLPFDHFGYDAHNFTFDNHRFF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1617 349 SUPERFAMILY WRKY DNA-binding domain 130 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g1617 349 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g1617 349 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g1617 349 MobiDBLite consensus disorder prediction 92 109 - -
Mibi08g1617 349 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g1617 349 MobiDBLite consensus disorder prediction 69 116 - -
Mibi08g1617 349 FunFam WRKY transcription factor 53 118 195 - -
Mibi08g1617 349 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g1617 349 MobiDBLite consensus disorder prediction 77 91 - -
Mibi08g1617 349 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 298 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1617 Mibi-ChrMibi08 32719104 32720822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1617 5 332 WRKY Transcription Factor Family AT4G11070 36.905 8.49e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi08g1617 WRKY 8.4e-28 CL0274