Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1610 ATGAAATACATGTTTCTTCTCATTGTCACTTTCAAGATTATCAAGAAGAAGCTAAACAAGCTGCAAGAGGCAATGGGATTCCAAACACCCCATTCAAGTAAACCCAACAAAGTGCAACCCGTTACCAAACCCATTCCCTCCTCCTACGATTCATGGATGGCGAGGCATCCTTCAGCGTTGCGTTCATTTGATAGATTGATGAAAGGAGCAAGTGGGAAGGACATAGTTGTGTTTTTGGACTATGATGGCACCTTATCACCCATTGTAAATAACCCTGATCGGGCTTTTATGTCTGACGAGATGCGTGCAGCAGTGTGTGAAGTTGCTAAAAATTTCCCAACTGCAATAATTAGTGGAAGAAGCAGAGACAAGGTTAAAGACTTTGTGAAGTTAAATAATGTGTATTATGCTGGAAGTCATGGAATGGATATAATGGCACCATCAGTGCCAGCTAGATTCTCTGATGGCGACCACTATATCATGTCCCTCGACACCACAAAGGATAATGGAGTTCCTTTTCAACCTGCGAAGAAATTTTTGCCTGCAATTCGAGAGATATTGAAAGTATTAGAGGATAAAATAAAAGGCATCCAAGGTGCAACGATAGAGGACAATGGATTCTGCGTTTCTGTACACTTCCGGCAAGTCCAAGAAAAGGACTATGCTGAATTAGAAGAGAAGGTGAAGTCTGTGCTTGAAAAACATCCAGACTTTTGCTTCACTGAGGGTAAAAAGGTTCTAGAGATAAGGCCATCCATAGAATGGAACAAAGGTCACGCCCTGGAATATTTTCTGGACACACTGGGGTTAAGCAGTTCCAGCAATATCCTTCCGGTGTACATTGGTGATGATCGAACCGATGAAGATGCTTTTAAGGTGATACAGAATAGAGGACAAGGCTATCCAATTGTAGTGTCTTCAACTCCAAAGGACACAAAAGCTCTGTATTCTCTTAGAGACCCGTCAGAAGTGCTAATTTTCTTGTCGCGTCTGGCGAAATGGAGGAAAACCATTATCGGCTCCAATTAG 1029 0.4218 MKYMFLLIVTFKIIKKKLNKLQEAMGFQTPHSSKPNKVQPVTKPIPSSYDSWMARHPSALRSFDRLMKGASGKDIVVFLDYDGTLSPIVNNPDRAFMSDEMRAAVCEVAKNFPTAIISGRSRDKVKDFVKLNNVYYAGSHGMDIMAPSVPARFSDGDHYIMSLDTTKDNGVPFQPAKKFLPAIREILKVLEDKIKGIQGATIEDNGFCVSVHFRQVQEKDYAELEEKVKSVLEKHPDFCFTEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIQNRGQGYPIVVSSTPKDTKALYSLRDPSEVLIFLSRLAKWRKTIIGSN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1610 342 FunFam Trehalose 6-phosphate phosphatase 181 339 - -
Mibi08g1610 342 TIGRFAM T6PP: trehalose-phosphatase 178 333 IPR003337 GO:0003824|GO:0005992
Mibi08g1610 342 Gene3D - 172 339 IPR023214 -
Mibi08g1610 342 Gene3D - 75 152 IPR023214 -
Mibi08g1610 342 CDD HAD_TPP 76 324 - -
Mibi08g1610 342 Pfam Trehalose-phosphatase 78 322 IPR003337 GO:0003824|GO:0005992
Mibi08g1610 342 SUPERFAMILY HAD-like 76 337 IPR036412 -
Mibi08g1610 342 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 77 295 IPR006379 -
Mibi08g1610 342 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 18 337 IPR044651 GO:0004805|GO:0005992
Mibi08g1610 342 Coils Coil 214 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1610 Mibi-ChrMibi08 32618476 32620463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1610 77 332 Trehalose Biosynthesis Gene Families AT1G23870 26.471 1.33e-10 60.8