Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1609 ATGGATTGCAACAAAGATGAGGCTGTTAGGGCCAAGGAGATTGCAGAGAAAAAATTTTCAAACAGGGAATATGCTGGCTCAAAGAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCACTCGATGGTCTTTCACAGTTTTTAACCAACCTTGATGTTTATATCTCTGCTGAGAATAAAGTTAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAACCCCTTCGACGATGAAGAGACAGTTAGAAAACAGTACAGGAAGCTGGCTCTCACTCTTCACCCAGATAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGTTGGTTTCAGAGGCATGGAGTTTGTTGTCAGATAAAACTAAGAGACTAGAATATAACCTGAAGAGGAGTCTGAAAGGTTTTCAACATAAAACTCCTAACCATGCTGGATCTCAATCGGAAGTACCTGGTTCAAATGGTTTTTATAATTTTAACAAGAATGTAACTTCAAATGTGAGGGCTGGAAATAGTAATGCCCAGGCACGCCATGCCTCGGCTCCTCGTCCACAGAAAAAGGCTGATACTTTTTGGACTATTTGTAATCGATGCAGGACTCATTACGAATACCTTAGGGTTTATTTGAATCATAGACTTCTATGTCCCAATTGTAATGAGGCTTTCTTGGCTATAGAGAAGGAGCCACCTCCCAACTATTTCAAGTCAACAAATTGGTCTTCTCGCCAGCAGCATCAGAGTTCTCGACATCATACTTCCAGTAATAATCAAGCCAATGCTGGAAATAAATATACAGTTTCTCAAAATTCAGAAGCCAGTGGTACTTCAGGCATGTCGTCATTTAGTAAAACAAGTTTTCAGTGGGGCCCTCACTCTAACATGGCTGGTTTTGGTGGTATGGATGGATCATCATCAGTTGCTGCTCAAGCTGCAAGTGTTGTGCAGCAGGCTAGTGAGAAAGTCAGAAGGGAACGAGAGGGAGCACCGTCAATTGCTGAATGGGAGAGGAGTCAAATGTCTAAGAGGACTGATGGTTCTTTTCATAAAGTGGAGAAACCTTGGAAGAAGAGGAGGACAGATGATACTGGTATGAATGGTATTAAAGGATACATGACAAACCATATGACCATGGGACAAGGAGCAGCTGGTGCGGGATATACTTCTGATTTAAGAAAAGCTAACTGGGAAACTGAAAGAGGCTATGGTTTTTCTGGCATGAAGCCTAGCAGTACAAGAGAGTTGTCATTGTTTGAAATCCGAAACATGTTGGTGGACAAAGCACAAAGTGAAATTCGTAAGAAACTTGAAGATTGGAAATTAGCTCAATCTAAGATCGCAAGCAAGTCCAAAGAGAATAAGAGACAAAAAGGTGCGATGACTGGTAAAGCATCTGATCCAAAGAAGCATGGAGAGTCCATTCTTGATAATAGCTGTCATGTAGAAGGTGATTCTTTCCCTGACACATCTGATAATATGGTTAAGGAGGATCAATCATCCTACATCATAATGAATGTACCAGACCCTGATTTCCACAATTTTGACCTGGATAGAACTGAAAATGCCTTTGGTGAGGACCAGGTTTGGGCTGCTTATGATGATGATGATGGAATGCCTCGTTATTATGCTCGAATTCACAAGGTGTTATCTATGGAGCCATTTAGAATGCGAATCAGTTGGCTTAACTCTAGAAGCAACATTGAATTGGGTCCCATAGATTGGGTAGGTGCTGGTTTTACTAAAACTTGTGGGGACTTCAGGACTGGCAGGCATGAAATAACTGAGTCATTGAATTCATTCTCTCACAAGGTTAGGTGGACAAAAGGCACCAGGGGAGTGATTCGCATTTTCCCCCTGAAAGGGGAAGTCTGGGCTCTTTATAAGGACTGGTCTCCCGATTGGAGCGAACAGACTCCAGATGACGTGATACACAAATATGATATGGTGGAGGTGCTTGAAGATTTTGATGAGGAGCTCGGAGTATTAGTTGCGCCATTGATTAAGCTTCCAGATTTCAGGACTGTGTTTAGAAGGCATGCTGACCCTGATCGGGTGACAAGAATTCCTAAAGGGGAGATGTTTCGCTTTTCTCATCAGGTTCCTAATTGTGTGCTTACAGGCGAAGAAGCTGATAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCAGCTACACCTTTAGACCTTCTCCAAGCCACTACAGAATCTAATGAAAGATCGGGTGCTGAAAGGCCTGATGAAGACGCTTTGCCCAATTCAACTGAAATGGAGAAAGCTTCAGAAACAAGAGGAGGGGAACAATTGAACGAGATTTTTTCATAG 2316 0.4231 MDCNKDEAVRAKEIAEKKFSNREYAGSKKFALKALNLYPALDGLSQFLTNLDVYISAENKVSGEMDWYGILGVNPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNLKRSLKGFQHKTPNHAGSQSEVPGSNGFYNFNKNVTSNVRAGNSNAQARHASAPRPQKKADTFWTICNRCRTHYEYLRVYLNHRLLCPNCNEAFLAIEKEPPPNYFKSTNWSSRQQHQSSRHHTSSNNQANAGNKYTVSQNSEASGTSGMSSFSKTSFQWGPHSNMAGFGGMDGSSSVAAQAASVVQQASEKVRREREGAPSIAEWERSQMSKRTDGSFHKVEKPWKKRRTDDTGMNGIKGYMTNHMTMGQGAAGAGYTSDLRKANWETERGYGFSGMKPSSTRELSLFEIRNMLVDKAQSEIRKKLEDWKLAQSKIASKSKENKRQKGAMTGKASDPKKHGESILDNSCHVEGDSFPDTSDNMVKEDQSSYIIMNVPDPDFHNFDLDRTENAFGEDQVWAAYDDDDGMPRYYARIHKVLSMEPFRMRISWLNSRSNIELGPIDWVGAGFTKTCGDFRTGRHEITESLNSFSHKVRWTKGTRGVIRIFPLKGEVWALYKDWSPDWSEQTPDDVIHKYDMVEVLEDFDEELGVLVAPLIKLPDFRTVFRRHADPDRVTRIPKGEMFRFSHQVPNCVLTGEEADNAPKGCRELDPAATPLDLLQATTESNERSGAERPDEDALPNSTEMEKASETRGGEQLNEIFS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1609 771 PANTHER BNAC03G44070D PROTEIN 1 724 - -
Mibi08g1609 771 SMART dnaj_3 65 122 IPR001623 -
Mibi08g1609 771 Pfam DnaJ domain 66 127 IPR001623 -
Mibi08g1609 771 Gene3D DnaJ domain 63 177 IPR036869 -
Mibi08g1609 771 PRINTS DnaJ domain signature 86 101 IPR001623 -
Mibi08g1609 771 PRINTS DnaJ domain signature 68 86 IPR001623 -
Mibi08g1609 771 PRINTS DnaJ domain signature 102 122 IPR001623 -
Mibi08g1609 771 MobiDBLite consensus disorder prediction 445 475 - -
Mibi08g1609 771 CDD DnaJ 66 119 IPR001623 -
Mibi08g1609 771 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Mibi08g1609 771 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Mibi08g1609 771 MobiDBLite consensus disorder prediction 233 261 - -
Mibi08g1609 771 Pfam Domain of unknown function (DUF3444) 501 707 IPR024593 -
Mibi08g1609 771 MobiDBLite consensus disorder prediction 445 486 - -
Mibi08g1609 771 MobiDBLite consensus disorder prediction 729 771 - -
Mibi08g1609 771 MobiDBLite consensus disorder prediction 737 762 - -
Mibi08g1609 771 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1609 Mibi-ChrMibi08 32600815 32603130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1609 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.761 4.94e-30 120