Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1605 ATGGAGTGGGGCCCAAAACAGCAAGAGAAGTTTGTGAGGTTTCGGGATTGGAATTCAGACAAGGGTTCTGAAAGTCAGTATTCTGAAAATGCCATAATGCGTCCAGGGAGAATAAGAAGTACACTAAGTTCAATTTCAGCTAAGTTTCAAAGAGGATTTGAATCTGGTTCTGAGGGTATAAAGAGATTTAGAAAATCATTCAAATCTTTTCCATCTGACAGAAATTTGGGTTGGGGTTTCAGTTCTAGAAAGAAAATCCTTGATCCACAAGGCCCATTCCTTCAGAAGTGGAACAAGATATTTGTATTATCATGTATTATTGCTGTATCACTGGATCCTCTATTCTTTTATGTCCCTATCATTAATGATGAGAAGAAATGCCTTTCATTGGACAACAAGATGCAGATAACAGCCACAATTTTAAGGTCTTTCTCAGATATCTTTTACATAGTCCACATTATTTTCCAGTTTCATACCGGATTTATTGCACCATCTTCTCGAGTATTTGGAAGAGGTGTTTTGGTTGAAGATGCTTGGGCAATAGCAAAGAGGTATCTGGCATCATACTTCTTTGTTGACATTCTTGCCGTTCTTCCCCTCCCACAGGTGGTGATTTTAATTATAATTCCGAAGATGGGAGGCTTTAAACCGTTGAACACAAAGAACTTGCTGAAATTTATTGTTTTCTTCCAATATGTGCCAAGGGTATTACGAATTATCCCATTATATAAAGAAGTGACAAGGACCTCTGGCATCATCACTGAAACTGCTTGGGCTGGAGCTGCATTTAACCTCTTTCTTTACATGCTTGCGAGTCATGTTGTAGGTGCCTTTTGGTATTTGTTTTCCATAGAAAGAGAGACGACGTGCTGGCAAGATGCCTGTCGAGGAAATAGCACCTGCAACAAGGCTTATTTGTACTGTGATAATAGTCAAGGGTCGAGTAATATTGCAACATTCTTGAATGCTTCTTGCCCAATAGTTGAGGATTCAGAGAAATTCAATTTTGGAATATTTCTTGATGCGCTTCAATCCGGTGTTGTGGAGTCAAGAGATTTCCCTCAGAAGTTTTTTTACTGCTTTTGGTGGGGCCTCAGAAATCTAAGTTCTCTTGGTCAGAACCTGGCAACAAGTACCTTCGTCTGGGAGATTTGCTTTGCAGTTTTCATTTCCATCTTTGGTTTGGTGTTGTTTTCATTTCTTATTGGAAACATGCAGACATACTTGCAATCAACAACTACGAGATTAGAAGAGATGAGAGTGAAAAGAAGAGATGCAGAACAGTGGATGTCTCATCGATTGCTCCCAGATAGTCTAAGAGAGAGAATCAGACGGTATGAACAATACAAATGGCAAGAAACCAGAGGTGTTGATGAAGATAATTTGATCAATAATCTTCCCAAGGATTTGAGAAGGGATATTAAGCGCCATCTTTGCTTGGCTCTACTGATGAGAGTGCCAATGTTTGAGAAAATGGATGACCAACTGTTGGACGCAATGTGTGACCGACTCAAGCCAGTGCTTCACACTGAAGAAAGCTGCATTGTTCGGGAAGGAGACCCGGTCAGTGAGATGCTCTTCATAATGCGAGGCAAGCTATTGACAGTGACTACTAATGGCGGAAGAACAGGCTTCTTCAACTCCGAATATCTCAAGGCTGGCGATTTCTGTGGAGAAGAGCTTCTCACATGGGCCTTGGACCCACATACCTCGTCCAACCTTCCCATCTCAACCAGGACTGTTCAAACCCTTTCAGAAGTCGAAGCCTTTGCTCTAAAAGCCGATGACTTGAAGTTTGTGGCATCGCAGTTTCGACGTCTTCACAGTAAGCAGATTCGCCATACTTTCAGGTTCTACTCCCAACAATGGCGTACATGGGCTGCATGTTTCATACAAGCAGCGTGGCGCCGGTATAGTAAGAAGAAGCTTGAAGAGTCTCTCCGGGAAGAGGAGAATAGGCTGCAAAATGCTCTGGCAAAGGCAGGTGGTAGCTCTCCTAGTTTAGGTGCCACAATATATGCTTCTAGATTTGCAGCTAATGCACTTAGAGCTTTACGCCGAAATGGCTCTAGGAAGACAAGGGTGCAGGAGAGACTACCACCCATGCTGCTTCAGAAACCTGCGGAACCTGACTTCACTGCGGAAGAGCAATAG 2154 0.4248 MEWGPKQQEKFVRFRDWNSDKGSESQYSENAIMRPGRIRSTLSSISAKFQRGFESGSEGIKRFRKSFKSFPSDRNLGWGFSSRKKILDPQGPFLQKWNKIFVLSCIIAVSLDPLFFYVPIINDEKKCLSLDNKMQITATILRSFSDIFYIVHIIFQFHTGFIAPSSRVFGRGVLVEDAWAIAKRYLASYFFVDILAVLPLPQVVILIIIPKMGGFKPLNTKNLLKFIVFFQYVPRVLRIIPLYKEVTRTSGIITETAWAGAAFNLFLYMLASHVVGAFWYLFSIERETTCWQDACRGNSTCNKAYLYCDNSQGSSNIATFLNASCPIVEDSEKFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLGQNLATSTFVWEICFAVFISIFGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEDNLINNLPKDLRRDIKRHLCLALLMRVPMFEKMDDQLLDAMCDRLKPVLHTEESCIVREGDPVSEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHTSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQIRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQNALAKAGGSSPSLGATIYASRFAANALRALRRNGSRKTRVQERLPPMLLQKPAEPDFTAEEQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1605 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 78 712 - -
Mibi08g1605 717 FunFam Cyclic nucleotide-gated ion channel 1 486 604 - -
Mibi08g1605 717 FunFam Cyclic nucleotide-gated ion channel 1 415 479 - -
Mibi08g1605 717 Gene3D Jelly Rolls 486 606 IPR014710 -
Mibi08g1605 717 SMART cnmp_10 488 619 IPR000595 -
Mibi08g1605 717 Gene3D Helix hairpin bin 414 479 - -
Mibi08g1605 717 Coils Coil 640 660 - -
Mibi08g1605 717 SUPERFAMILY Voltage-gated potassium channels 88 410 - -
Mibi08g1605 717 SUPERFAMILY cAMP-binding domain-like 417 610 IPR018490 -
Mibi08g1605 717 MobiDBLite consensus disorder prediction 689 717 - -
Mibi08g1605 717 CDD CAP_ED 488 619 IPR000595 -
Mibi08g1605 717 ProSiteProfiles cAMP/cGMP binding motif profile. 488 572 IPR000595 -
Mibi08g1605 717 Gene3D - 99 412 - -
Mibi08g1605 717 Pfam Ion transport protein 97 415 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1605 Mibi-ChrMibi08 32562896 32569809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1605 7 716 Ion Channels AT5G53130 78.601 0.0 1131