Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1601 ATGAAGTCCAGAACTTGTTTGTGGAGCTTGGCATTGCTCTTGCTTACCCACAATAATGGGTGGTGCCAACCACGTCCTCACTGCAAGGAATTAAGGTGCGGACGCCATGGTGTTGTTCGATTCCCTTTCCGACTCAAAGATAAGCACCCGGTTGAGTGCGGCTATCCTGGCTTTGATATCATTTGTAATCACCACCACCACCTCCTACTTCAACTTCCCACACCATCAGGTTCTGTTGACCTCTTCATCAAACATATCGATTACCTATCCCACTCACTTCAAGCATATGATCCCCAAAATTGCCTTCCCGCCCTCTTCCTCAAACTCCACAACTCCACAATTTCACCCTTCAAATTTAAGTCACCCCATCGCTTCGAACACATTACTTTCCTCAATTGCTCTTCAAACGGCCATAGGCACCACCTAAACGGTTTCCATCCCAGCTTTCAACACATAGACATGTTCTCTTGCCCGATTTTTGTTGGTGACTCCGACTATAGTCTCATTGAAGATGACCTACTACTCTGTACCAAGATTATCACTATTTCATCTAATCAGCAGGGGGATGACATACTGCAAAATGTTTTGTTCCTCAGTTGGATGAAACCAAATTGTACTAGATGCGAAAAGATGGGACAAATGTGCAAATTGAAGAGAAATGGCACAAAAGATGAGGTCGAATGTTTTGACCATGATCCCAAGATATCTAGATCAACTATTAAACTAATTGCAGGTTTAACCTCGGCTTCAATTATGCTGCTTCTGGTACTCCTTGTACTCTATCAATTCTACAGAAATTTGAGAATGAAAAGAGAAGATTTAGCGAGACTGAAAAAGTTTTTGGATGACTATCGGTTGCTCAAACCTACCAGATTCACTTTTGCTGATCTGGACAGAATCACGTGTGGTTTTAAAGAGAAGTTAGGTGAAGGTGCTCATGGAGCGGTGTTCAAAGGAAAGCTTTCTGATGAAATTTTGGTGGCTGTAAAGATCCTCAATAACTCTGAGGATGGTGACGGCAAAGAGTTCATAAATGAAATGGGAGTTATAGGTAAGATCCACCATGTCAATGTGGTTCGCTTATTGGGCTTCTGTGCTGATGGATTTCGCCATGCTCTTGTTTATGATTACTTTCCAAATGGCTCCTTGCAAAACTTCATATCTGCTCCAAATTATGAACATGGTTCATTCCTTGGCTGGGAAAAGCTGCAACAAATTGCTATTAGTATAGCTAGAGGGGTTGAGTATCTTCACCAGGGTTGTGATCATCAAATTCTTCACTTTGACATTAATCCTCATAATATATTATTGGATGACAACTTCATTCCCAAAATATCCGATTTTGGTTTAGCCAAGCTATGCCCGAAAAATCAAAATACGGTGTCCGTGACTGCAGCAAGGGGAACTTTAGGTTACATTGCGCCTGAAGTTTTCTCTAGAAATTTTGGGAATGTGTCATACAAGTCAGATGTTTACAGCTTTGGAATGTTGTTAATAGAAATGGTGGGAGGAAGAAAGAATACTGACAAGGTCCAAGAAAACTTTCAAGTTCTATACCCAGAATGGATTCATAGTTTAGTTGAGGGAAAAGATGTGCATATCCCAATAGAAAGTGAAGAAGGTATTAGAATTGCAAAAAGGCTAGCTATTGTAGGACTTTGGTGCATTCAATGGCATCCAGTAAATCGTCCATCCATGAATAAGGTAGTGCAAATGTTAGAAGGCGACGAAGATAAGTTAAGAGTCCCCCCTGCTCCATTTGATGACTCCTCCTGCATCAATTCAACTACGGCAACTACTGCAAGACATTTAGGTTTAGAGTTGGAAGTGATTCATGAATTGGAATGA 1848 0.4113 MKSRTCLWSLALLLLTHNNGWCQPRPHCKELRCGRHGVVRFPFRLKDKHPVECGYPGFDIICNHHHHLLLQLPTPSGSVDLFIKHIDYLSHSLQAYDPQNCLPALFLKLHNSTISPFKFKSPHRFEHITFLNCSSNGHRHHLNGFHPSFQHIDMFSCPIFVGDSDYSLIEDDLLLCTKIITISSNQQGDDILQNVLFLSWMKPNCTRCEKMGQMCKLKRNGTKDEVECFDHDPKISRSTIKLIAGLTSASIMLLLVLLVLYQFYRNLRMKREDLARLKKFLDDYRLLKPTRFTFADLDRITCGFKEKLGEGAHGAVFKGKLSDEILVAVKILNNSEDGDGKEFINEMGVIGKIHHVNVVRLLGFCADGFRHALVYDYFPNGSLQNFISAPNYEHGSFLGWEKLQQIAISIARGVEYLHQGCDHQILHFDINPHNILLDDNFIPKISDFGLAKLCPKNQNTVSVTAARGTLGYIAPEVFSRNFGNVSYKSDVYSFGMLLIEMVGGRKNTDKVQENFQVLYPEWIHSLVEGKDVHIPIESEEGIRIAKRLAIVGLWCIQWHPVNRPSMNKVVQMLEGDEDKLRVPPAPFDDSSCINSTTATTARHLGLELEVIHELE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1601 615 ProSiteProfiles Protein kinase domain profile. 302 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1601 615 SUPERFAMILY Protein kinase-like (PK-like) 286 574 IPR011009 -
Mibi08g1601 615 Pfam Protein kinase domain 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1601 615 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 591 IPR045874 GO:0004672
Mibi08g1601 615 Gene3D Phosphorylase Kinase; domain 1 278 377 - -
Mibi08g1601 615 FunFam S-receptor-like serine/threonine-protein kinase 273 377 - -
Mibi08g1601 615 Pfam Wall-associated receptor kinase galacturonan-binding 28 96 IPR025287 GO:0030247
Mibi08g1601 615 Gene3D Transferase(Phosphotransferase) domain 1 378 583 - -
Mibi08g1601 615 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Mibi08g1601 615 FunFam PR5-like receptor kinase 378 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1601 Mibi-ChrMibi08 32515267 32517274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1601 33 586 Receptor kinase-like Gene Family AT1G66910 34.046 1.86e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mibi08g1601 Pkinase 6.6e-45 CL0016