Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1586 ATGAACTACGGCAGGCTTCAGCCGTCGGAGCCCGGCGGCTCCTCCCGCCGCACCGACGACCCCATTCCTCCGCCGCCCTCCTCCTCCCGCCGCAACAAAAAACTCATCCTCCTCTCGTCCGTCGCCCTCTTCCTCATCGTCGCCGCCGCCGTCTCCGCCGTCCTCCTCGCCGGAATCCGCCCTAGATCTTCTTCCCGGCGAGATTCCGGCATATCCGGGCGGCCAACCCAGGCAATATCAAAAACGTGCAGCAAAACTCAATTCCCCTCGCTCTGCATAAAATCCCTCCTGGATTTCCCAGGGTCCTCCGCCGCGTCGGAAAAAGAGCTGGCCCACATTTCCCTGAACGTCACCCTCCAACACCTCACCAAAGCCCTCTTCTCCTCCACCGCCATCTCCAACCTCCCCATGGACCTCCGCCAGCGCTCCGCATTCCAAGACTGCCTCGAGCTTCTAGAAGATTCCGCCGACTCCCTCCTCCGCTCCCTCACCGCCGCCGTCTCCGGCGCCGGATCCACCGACGACGTGCTGACGTGGCTCAGCGCCGCCCTCACCAATCAGGACACCTGCGGCGAGGGATTCGCCGATACGCGCGGGAATATTAGGGATCAGATGGCCGGGAATCTGAAGGACTTGTCGGAGTTAATTAGTAACTGCCTCGCGATTTACGCCGGGAGTGATGCCGGAAGCGATTTTTCCGGCGTTCCGATTCAGAATAGGAGGAGATTGATGGGAGAAAATGGCAATGGCGAGTTTCCGGTGTGGTTGAGTGAGAGGGATAGGAGATTGTTGGAGACGCCGGCGCCGGCGATTCAGGCCGATATCGTCGTGGCGAAGGACGGAAGCGGGACGGTGAAGACGATAACGGAGGCGATAAAGAAAGTGCCGGAGCATAGTGATCGCCGGATTGTTGTGTACGTGAAGGCAGGAAGGTACGAAGAGGAAAATTTGAAGGTTGGGAGGAAGAAAACCAATGTGATGTTCGTAGGTGATGGGAAGGGTAAGACGGTCATCACAGGCGGCAGAAATTTTGCTCAAGGCACCACCACCTTCCACACAGCCTCCTTTGCTGCTTCTGGGGCTGGTTTTATTGCAAAGGACATAACATTTGAGAACTATGCGGGTCCCGGGAAGCACCAGGCGGTGGCGCTCCGTATCGGAGCCGACCACGCGGTGGTGTACCGGTGCAACATCATCGGATACCAAGACACATGTTACGTTCACTCCAACCGTCAGTTTTTCCGGGAATGTGATATATATGGCACCGTTGACTTCATCTTTGGCAACGCCGCAGTGGTATTCCAAAACTGCAACCTCGTATCTCGAAAGCCCATGGACCAACAAAAGAACACCATAACGGCCCAAAATAGAAAAGACCCGAATCAGAACACAGGTATATCGATCCACAACTGTCGGATCCAAGCCACTTCGGATCTCGAGGCATCCAAGGGAAGCATCCCAACCTATCTGGGCCGTCCGTGGAAGACATACTCTAGGACCGTTTACATGCTATCCTTCATGGGTGATCACATCCATCCACGTGGATGGTTGGAGTGGAATGCTACAGCTCCAGTAGACAAATTGTATTATGGAGAGTATATGAATAGTGGGCCGGGTGCAGCAGTTGGAGGCCGGGTCAAATGGCCCGGGTATCGGGTTATAACTTCGACCGTGGAGGCGAGTAGGTTCACGGTGGCCCAATTCATATCGGGGTCGTCGTGGTTGCCGTCAACGGGGGTGGCATTTGTTGGAGGATTGTCTGACTAA 1767 0.5608 MNYGRLQPSEPGGSSRRTDDPIPPPPSSSRRNKKLILLSSVALFLIVAAAVSAVLLAGIRPRSSSRRDSGISGRPTQAISKTCSKTQFPSLCIKSLLDFPGSSAASEKELAHISLNVTLQHLTKALFSSTAISNLPMDLRQRSAFQDCLELLEDSADSLLRSLTAAVSGAGSTDDVLTWLSAALTNQDTCGEGFADTRGNIRDQMAGNLKDLSELISNCLAIYAGSDAGSDFSGVPIQNRRRLMGENGNGEFPVWLSERDRRLLETPAPAIQADIVVAKDGSGTVKTITEAIKKVPEHSDRRIVVYVKAGRYEEENLKVGRKKTNVMFVGDGKGKTVITGGRNFAQGTTTFHTASFAASGAGFIAKDITFENYAGPGKHQAVALRIGADHAVVYRCNIIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCNLVSRKPMDQQKNTITAQNRKDPNQNTGISIHNCRIQATSDLEASKGSIPTYLGRPWKTYSRTVYMLSFMGDHIHPRGWLEWNATAPVDKLYYGEYMNSGPGAAVGGRVKWPGYRVITSTVEASRFTVAQFISGSSWLPSTGVAFVGGLSD 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1586 588 FunFam Pectinesterase 268 586 - -
Mibi08g1586 588 MobiDBLite consensus disorder prediction 1 30 - -
Mibi08g1586 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 223 IPR035513 -
Mibi08g1586 588 Gene3D - 268 586 IPR012334 -
Mibi08g1586 588 SUPERFAMILY Pectin lyase-like 269 585 IPR011050 -
Mibi08g1586 588 PANTHER PECTINESTERASE 47 576 - -
Mibi08g1586 588 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Mibi08g1586 588 CDD PMEI-like_3 83 222 - -
Mibi08g1586 588 Pfam Pectinesterase 274 571 IPR000070 GO:0030599|GO:0042545
Mibi08g1586 588 SMART PMEI_2 74 222 IPR006501 GO:0004857
Mibi08g1586 588 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 223 IPR006501 GO:0004857
Mibi08g1586 588 Pfam Plant invertase/pectin methylesterase inhibitor 78 222 IPR006501 GO:0004857
Mibi08g1586 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 76 225 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1586 Mibi-ChrMibi08 32332473 32336131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1586 1 587 Carbohydrate Esterase AT5G53370 64.924 0.0 795