Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1579 ATGGACGAAAGATTGCCCTGGAAGAAACGCCACCTTCGCAACAAGCGTCAGATGGAAATTCCTTCTGCTAATGTTACTGCACTGTCGCTGGACGAAAGGGAGCCGAAACGAGCCAGAGTTGAAGAAGCAAATTCTGAAAATCGGCTTGTGGATTCCGTTCAGGATGGAGTTCGTGGAAATGGCGGTCCGAAAAATGTTGTTCTAGAATTTGCTCGCCCTCTTCGTATAGTGCGAGGGGAAGGAGTGAATCCTGACGTGGTGAGTACGGACATTGATCTGTGTAGTAGCGGATTTTCGGCTCAAATTCGCGGTGATGGAGGAAAATTTCAAGCCGAGTTTGGTAAAGGTGGGAGGAGTCATGATGATATTCTCAGTCATGAGAGTGGTGTTGATCAACCATGGATCAGAGAATGCACTGTTGGAAATGGCGGTGGTGTTGCTGATGCTGGTGAAGAAGAGCACGTAAGTAGGAGAGGATCATGTGTTTGTGAAAATGACTCTGTGGGTATTCTTACTGTGTGTAAACATGGAAAAGACGAGAATGGCCTGCTGAAAAAAGTATCACTGAGGAAGAGAGTTCATGTTCTAGAAGAGGGACGAGGGCTGTTAAGTGAAGGTAGTGACGATGAAATCTTGAGCCATTGGTTAAGAAGATATCGGTCAATGAAGAGTTCCAAGAATATGAATAAACGGCTTACTGGGGGAGGAACTATGAAACTGAATGGACAAACTGTTAATGGAGATGAAAGTGAGGGTACATTCAAAGTGGTCCCTGTTGAGATCATTGCTAGTGATGTAGGTGCAGGCAGTCTTAAGAATTATTGTGAACCAAAGGTTTTGAAAAGTGGAAAGAAGCGTGGTAGACCGAAGGGGTCAAAAAATAAAATGAAGAGTAATTTGTGTGCTATTGATGCAGGTGCGAGTGATGACAATGAAAAACCAAAGAGGCGTGGTAGGCCCAAGGGATATAGAATTGGATGGAAGATTGTTCCATGCCGTAGGAATTCAAAGTCAGTCGACACTGTAGCACCAAAGAAGCGTGGCAGACCAAAGGGCTCAAAAAATAAAACGAAGAATAGTGCAAGTAATGTTGGTGTTGGTGATATTGAAGCACCAGCAAAGCGAGGGCGACCAAAGGGTGCAGAAAATAAGAAGTGGATTGTTGTCTGTGATAATAATGCAGAGGTGGATGACATTGGAACACGTAAAAGAAGAGGTCGACCAAAGGGTTCAAAAAATAAAAAGGGGGTGGTTGCATGTGTTAGTAATGAAGTTGCAATTGACATTGGAACACCCAAGAAGCGCGGTAGACCAAAAGGTTCAAAAAAGAAAAAGCTGAGAGTTGCCTGTAATAGCAATGCAAGTGCAGGTGACATGGAAAACCCAAAGAAGTCTACAGTGAAGCATGGTCAACCATGGAACTCAAGAAACAAGAAGAAAAATTTGGGAGATCAGATAAATGAAGAAACGGTTGGTGAGGTTATGTTTGTTCATATGGCGTGTGATAAAGCTATTGTTCTTACAGGTTCAGGAAATAATTTCACCAGTAGTGTAGGTGTGCAAGATATAGATTCACTTATTAAAAGTATTGATCTACAGCAAGAGTTGGGTGTTCAATCACAGAGTGTTACTCATGATAGTGATGGGAATAAGGATGTGCCTTCAAAGGGCTCTGGTGATGGTGAGTTTCAAAATGAGAACAACCATGTTAAAGTTAGGCATGATCAACCAAAGGGTAGTATTGAAAGAAAAGAGCAATTGACTAGAAAATTTACTGGAAAATCTAACGAGGAAATGTTGGACATTTGCATGGCTAAACCAGAGAATGCGATCATTATTGCTGAAGTTGAGGCAAACAAGGAATTTACTATTGGTAGATCTGGTGAACATGTATCTGGAAACAATATAGGTAAGGCAAATAATATTTGGGGCGGGTCGAAGAGCTTCATTGTCAAAGAAAAGAAGACTGTCCAGCCTTTTGATTCAGAGATTGAGAGGCATGACCATGTAGCTGACATAGATGGAAGAACATCTGCTGAAGCTTCTTGTAGAAATGGTATTGATGGGCAAAAACTTAAGCATGGAAAACAAAAACAGGGTTCAAAAAAGAAGAGACTATCTACAGAGCGCTACACCTTGAAGGGTTCAAGAGGAAAGGCACCAAATGTAGCTTCAGTGGAAGATGAGAGTGAATCAGTTGAAGTGAAGTACAAATCCAGGAGGAATGAGAGATCAAATAATAAGAGAGTTCAATCCTCACAAAATAAGAAGAGAATTATTTCTGGTAGAGTGGTTAATTACTCCAGAGATCCTGGAAATAAAATGATGAAAACAGAAAGGTTAAAATGTGGACCTGGAAGCATTCAGACCAGGTCTAGTGGAAGGCTGAGAAAATTGTCAAACCATAAAGCGGAATCTTTAGCCAGCAGCATTCAGAAGTGGTGTAATGGAAGACTGAGAAAGTTGTCAAACCGTGGATTAGATTCTTCAGTTTTGATTGTTGATTCTAGAAGGAAAAAGGGCCTGCGGAATTTAAGGTGCCATCAGTGCTGGAGGAGTGATAGGAGTGGTGTCGTCATTTGTGGCAATTGCAAACGGAAGCGATATTGCTATGAGTGCTTAACAAAATGGTATCCAGACAAAACAAGGGATGAGATAGAATTTTCCTGTCCCTTTTGCCTTGGTTATTGTAATTGTCGGTTGTGTTTGAAGGAGGCTACTGCGAGAGTTGAATCAGATACTGATATCAATTTGCAGAAGCTGCTTTACTTGCTTAAGAAAATTCTTCCTTTACTTCAGCATATCCAACAAGAGCAGAGATCAGAAATGGAAATTGAATCTAGCTTGCACGGTACTCTGATTTTATTTAGTTCACAGCTGACAGAAGAAAATATCATGCAGTCGCAGGTTGATGATGATGATAGAGTGTATTGTGATAACTGTAATACATCCATCGTCAACTTGCACAGAAGTTGTCCTAATCCTAGTTGTAGTTACGATCTCTGTCTCACTTGCTGCATGGAGCTAAGAAATGGTCTTCATTGTGGAGATACTTCCAGTAACGGCAATGAGGGAGGGGCTGATATCTCATCCGAATTTTCTTGGAAAGCAAATATAAATGGTTTGATTCCGTGCCCTCCAAAATCAAGGGGAGGCTGTGGCACTACAGTTCTCTCATTGAGACGCCTTTTCAGAGCTAACTGGGTGGACGAATTGATTGGGAATGCAGAGGAACTTACCATCAAATATGAGCCCCCAAATGTTGATTCTACTAAAGGGTGTTCATTATGCCATAATTTTAGGATTGATACAGCACAGGATTTTGTGAGGCAGGCGGCTTCCAGAGAAAACTGTCAAGATAATTTGTTGTTCTGCCCAAATGCTATGCTCTTGGGAGATAAAGAATTTAAGCATTTCCAGATGCATTGGATAAACGGTGAGCCTGTTATAGTTAGAAATGCATTTGAAAAGGCTAAGGGCCTTAGCTGGGATCCAATGGTGATGTGGAGGGCATTTCGGGCGGCCAAGAGGATACTAAAAGAGGAGGCAACTGTGGTTAAAGCCATTGACTGCTTAGATTGGTGCGAGGTGGAAATTAATATCTTCCAGTTCTTCAAGGGCTACCTTGAAGGTCGTAGGTATAGGAATGGGTGGCCTGAGATGTTGAAGCTTAAGGATTGGCCTCCATCCAATGCTTTCGAAGAGTGTTTGCCTAGGCATGGTGCCGAATTTATAGCCATGCTTCCATTTAGTGACTATACTCATCCTAAATCTGGTGTTCTAAATCTCGCTACAAAGCTACCGATAGTTTTGAAGCCAGATTTGGGCCCCAAAACATACATTGCATATGGATCTTTAGAGGAACTCGGCAGAGGCGATTCTGTAACAAAGCTGCATTGTGATATCTCAGATGCGGTCAATATATTGGCGCATACAGCTGAAGTAAAGAGACCAGCGCCGCAAAGAAAAGCCATTAAAAAATTACGGGAAAAGCATGAAGCTGAAGATATGTGTGCGCTTTATGGCAGGATGACTGAAGGATTGGATTCTTGTAGAGAAAAACCGAAAGGGTGTTGCCTGAATATAAGCACGGGTTCTAAAATCCCTAGAAAGGAGGACACTATCGTGGGAGACAATTCTGTACTTAAAAGTCAGGTGTCAGAGGAAGAGAATATGAATAAGCAGCTGATTTTGTCTGCAGATTCGGGACCCTCAAGAGCTTATATAGCACTAGCTTGCACTCCAGCTTCTCCCAAAAGTGAAAAAAAAGACTGTGAATGGACGCATGGTGAAGTTAAAAAAGCAGTCCAAGAAAGCTCGAAAGGCAGGTGCGCTTGTGCTGAGGAGTCCCGTAATGGAATCATTTCCAACTCTGACAATGTTTGTGACAGTTCCTGTGCGGGGGTATGTTCTGAAGTCAAGAATGACAAGATAGAGTTACCTAGAATTGATAGGAGAACAGCAAAAGCTTTCCTTGAAAATAATGATGCGTCAGAGACCCAATACGGGAGTGCCGTATGGGACATATTTCGTAGGCAAGATGTGCCAAAGTTGACGGAGTACCTGAAGAAACACTATAGAGAATTCCGCCACATAAATAATCTTCCTGTGAATTCTATAATGCATCCAATTCATGATCAGATTCTTTATCTCAACGAAAGACATAAAAAGCAGCTAAAGGAAGAATTTGGCATTGAACCGTGGACTTTTGAGCAACACCCTGGTGAGGCTGTTTTCATACCTGCAGGGTGCCCGCATCAAGTGAGGAATAGACAGTTTGAAACATTTGTTATGTGTGATTGTTTCCCCCAGTCTTGCATAAAAGTGGCTCTCGACTTTGTTTCACCTGAAAATGTTCAAGAGTGTGTTCGATTAACGGAGGAGTTTCGGCTGCTTCCAAAGAACCATAGATCTAAGGAAGATAAGCTGGAGATAAAGAAGATGGCATTGTATGCTGCCAACGCTGCTATAACTGAAGCCATGAAATTAATGCAGAGGACATAA 5004 0.4201 MDERLPWKKRHLRNKRQMEIPSANVTALSLDEREPKRARVEEANSENRLVDSVQDGVRGNGGPKNVVLEFARPLRIVRGEGVNPDVVSTDIDLCSSGFSAQIRGDGGKFQAEFGKGGRSHDDILSHESGVDQPWIRECTVGNGGGVADAGEEEHVSRRGSCVCENDSVGILTVCKHGKDENGLLKKVSLRKRVHVLEEGRGLLSEGSDDEILSHWLRRYRSMKSSKNMNKRLTGGGTMKLNGQTVNGDESEGTFKVVPVEIIASDVGAGSLKNYCEPKVLKSGKKRGRPKGSKNKMKSNLCAIDAGASDDNEKPKRRGRPKGYRIGWKIVPCRRNSKSVDTVAPKKRGRPKGSKNKTKNSASNVGVGDIEAPAKRGRPKGAENKKWIVVCDNNAEVDDIGTRKRRGRPKGSKNKKGVVACVSNEVAIDIGTPKKRGRPKGSKKKKLRVACNSNASAGDMENPKKSTVKHGQPWNSRNKKKNLGDQINEETVGEVMFVHMACDKAIVLTGSGNNFTSSVGVQDIDSLIKSIDLQQELGVQSQSVTHDSDGNKDVPSKGSGDGEFQNENNHVKVRHDQPKGSIERKEQLTRKFTGKSNEEMLDICMAKPENAIIIAEVEANKEFTIGRSGEHVSGNNIGKANNIWGGSKSFIVKEKKTVQPFDSEIERHDHVADIDGRTSAEASCRNGIDGQKLKHGKQKQGSKKKRLSTERYTLKGSRGKAPNVASVEDESESVEVKYKSRRNERSNNKRVQSSQNKKRIISGRVVNYSRDPGNKMMKTERLKCGPGSIQTRSSGRLRKLSNHKAESLASSIQKWCNGRLRKLSNRGLDSSVLIVDSRRKKGLRNLRCHQCWRSDRSGVVICGNCKRKRYCYECLTKWYPDKTRDEIEFSCPFCLGYCNCRLCLKEATARVESDTDINLQKLLYLLKKILPLLQHIQQEQRSEMEIESSLHGTLILFSSQLTEENIMQSQVDDDDRVYCDNCNTSIVNLHRSCPNPSCSYDLCLTCCMELRNGLHCGDTSSNGNEGGADISSEFSWKANINGLIPCPPKSRGGCGTTVLSLRRLFRANWVDELIGNAEELTIKYEPPNVDSTKGCSLCHNFRIDTAQDFVRQAASRENCQDNLLFCPNAMLLGDKEFKHFQMHWINGEPVIVRNAFEKAKGLSWDPMVMWRAFRAAKRILKEEATVVKAIDCLDWCEVEINIFQFFKGYLEGRRYRNGWPEMLKLKDWPPSNAFEECLPRHGAEFIAMLPFSDYTHPKSGVLNLATKLPIVLKPDLGPKTYIAYGSLEELGRGDSVTKLHCDISDAVNILAHTAEVKRPAPQRKAIKKLREKHEAEDMCALYGRMTEGLDSCREKPKGCCLNISTGSKIPRKEDTIVGDNSVLKSQVSEEENMNKQLILSADSGPSRAYIALACTPASPKSEKKDCEWTHGEVKKAVQESSKGRCACAEESRNGIISNSDNVCDSSCAGVCSEVKNDKIELPRIDRRTAKAFLENNDASETQYGSAVWDIFRRQDVPKLTEYLKKHYREFRHINNLPVNSIMHPIHDQILYLNERHKKQLKEEFGIEPWTFEQHPGEAVFIPAGCPHQVRNRQFETFVMCDCFPQSCIKVALDFVSPENVQECVRLTEEFRLLPKNHRSKEDKLEIKKMALYAANAAITEAMKLMQRT 1667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1579 1667 MobiDBLite consensus disorder prediction 30 45 - -
Mibi08g1579 1667 SMART cupin_9 1237 1630 IPR003347 -
Mibi08g1579 1667 Pfam JmjC domain, hydroxylase 1502 1593 IPR003347 -
Mibi08g1579 1667 MobiDBLite consensus disorder prediction 227 247 - -
Mibi08g1579 1667 SUPERFAMILY Clavaminate synthase-like 1133 1650 - -
Mibi08g1579 1667 MobiDBLite consensus disorder prediction 681 757 - -
Mibi08g1579 1667 CDD cupin_RmlC-like 1542 1602 - -
Mibi08g1579 1667 MobiDBLite consensus disorder prediction 430 480 - -
Mibi08g1579 1667 MobiDBLite consensus disorder prediction 538 579 - -
Mibi08g1579 1667 MobiDBLite consensus disorder prediction 281 380 - -
Mibi08g1579 1667 Gene3D Cupin 1449 1639 - -
Mibi08g1579 1667 Gene3D Cupin 1118 1378 - -
Mibi08g1579 1667 SMART AT_hook_2 283 295 IPR017956 GO:0003677
Mibi08g1579 1667 SMART AT_hook_2 344 356 IPR017956 GO:0003677
Mibi08g1579 1667 SMART AT_hook_2 402 414 IPR017956 GO:0003677
Mibi08g1579 1667 SMART AT_hook_2 432 444 IPR017956 GO:0003677
Mibi08g1579 1667 SMART AT_hook_2 314 326 IPR017956 GO:0003677
Mibi08g1579 1667 SMART AT_hook_2 372 384 IPR017956 GO:0003677
Mibi08g1579 1667 MobiDBLite consensus disorder prediction 729 747 - -
Mibi08g1579 1667 ProSiteProfiles JmjC domain profile. 1256 1630 IPR003347 -
Mibi08g1579 1667 ProSiteProfiles Zinc finger RING-type profile. 847 893 IPR001841 -
Mibi08g1579 1667 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 413 1665 IPR045109 GO:0032454|GO:0033169
Mibi08g1579 1667 MobiDBLite consensus disorder prediction 16 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1579 Mibi-ChrMibi08 32260470 32270997 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi08g1579 JmjC 2e-13 CL0029