Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1577 ATGCTCATAGCCAAATCCTCACTCGCCTCAATACTTGAAAGCTCCAGCCTAGTTATCCAAATTCCTAAACGCCAGTTTCTGCATTCCTGGTTCGTTTCATTCTTCGTTCCTCTCTTGTTCTTCATGAGATTCTTACTGGCTCTGAATTTGAGTGCTTGTATGTCTATCTTTACGTTCAAGATTATGGGGAAGAAGAGTGGAGGTGGTTGGTTCTCGTCGGTGAAAAAAGTCTTCAAGTCTTCTTCTAAGGAATCGCACGTGTCAGAGAGGAAGGAAGATGAAGTGAAACGGCAGCATGAAGCGCCTGAAGTTGTGTTGTTTGAGAATTTTCCTTCAGAGAGTTCTCCTGATGATATTACCAATGAGGAGAGTACCACTTCCACGCCTGTGACTGAGGATAGACGACATGCCGTTGCTGTTGCCGCAGCAACTGCTGCAGCTGCCGATGCGGCTGTCGCAGCGGCTCAGGCGGCGGCGAGAGTGGTTCGGATGTCTGGCTATGGACGCCGATCGGAGGAAGACATAGCAGCAACAATCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCAAGGCGAGCGTTGAAGGGATTGGTTAGACTGCAAGCGCTGGTGAGGGGTCACAATGTGAGGAAGCAATCGCAAATGACAATGCGTTGTATGCAAGCGTTGGTGAGGGTGCAGGCCAGAGTTAGAGCTCGCAGGATCCAGCTGAGTCATGACAAACTTTACAAGAACGTGATGAAACATGATTTAGTGCCCATGAGTCCCCTTTATGAGCATGGTTGGGGCAACAATAGACGTCAAAGTTTCCAGAGAATCAAAGAAAGTGACTTGTGGAAGCATGAAGATGCAGTGAAGAGGGAGAGAGCTCTTGCTTACGCTTTTAACTATCATCAGCAACAGAATCAATCACCACATGCAGACCTGGATTTTGGTGAAGAAATGGGAACATATTCCAATGAGCTTGAACAAGCCAAGAGAGGTTGGAACTGGTTAGAGCATTGGATGTCCTCTCAACAACATCAACCCAGACACTTGGGCCAGCCGGAGAACTCTTATTACATGACCCACACTGCTACAACCACCGCCACCGCAGATGACGTGTCTGAGAAGACGGTGGAAATGGACATTGTTGCCCCTCCAAGCTCTAACAACACCATCATGAGCCAAAGCCTTTTTCTGGACTCAAGTCCAAGTCCCAGTAGGCGGCCCAATGAACTGCAGTCCCATCCTAATGGAAGTGTGCCTAGCTATATGGCCCCAACCCAGTCTGCAAGGGCCAAGGTAAGGGGCCAAGGCCCAGTTAAGCCACGTGGATCTCCTGGGCCGCAGTGGAATTCTTCAACAAGGAAGGACTACGTTATTGGGTCGGGCTGCGATTCCTCCAGCCCCGGTGGAGGTACGGCAAGTTACATGTTTATGAGGAGCCCAGGCCCAAAAATTAGTGGGGCCCACCTGCAGTCTAGACGGATGGCTGGAGGAAGCTCAGAGTATGTTGGTACTGAGGATTGGACACTGCCTCTAGGAGCCCATGCTTGGGCATGA 1551 0.499 MLIAKSSLASILESSSLVIQIPKRQFLHSWFVSFFVPLLFFMRFLLALNLSACMSIFTFKIMGKKSGGGWFSSVKKVFKSSSKESHVSERKEDEVKRQHEAPEVVLFENFPSESSPDDITNEESTTSTPVTEDRRHAVAVAAATAAAADAAVAAAQAAARVVRMSGYGRRSEEDIAATIIQSYYRGYLARRARRALKGLVRLQALVRGHNVRKQSQMTMRCMQALVRVQARVRARRIQLSHDKLYKNVMKHDLVPMSPLYEHGWGNNRRQSFQRIKESDLWKHEDAVKRERALAYAFNYHQQQNQSPHADLDFGEEMGTYSNELEQAKRGWNWLEHWMSSQQHQPRHLGQPENSYYMTHTATTTATADDVSEKTVEMDIVAPPSSNNTIMSQSLFLDSSPSPSRRPNELQSHPNGSVPSYMAPTQSARAKVRGQGPVKPRGSPGPQWNSSTRKDYVIGSGCDSSSPGGGTASYMFMRSPGPKISGAHLQSRRMAGGSSEYVGTEDWTLPLGAHAWA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1577 516 ProSiteProfiles IQ motif profile. 197 224 IPR000048 GO:0005515
Mibi08g1577 516 MobiDBLite consensus disorder prediction 443 471 - -
Mibi08g1577 516 MobiDBLite consensus disorder prediction 113 127 - -
Mibi08g1577 516 MobiDBLite consensus disorder prediction 110 133 - -
Mibi08g1577 516 MobiDBLite consensus disorder prediction 382 423 - -
Mibi08g1577 516 MobiDBLite consensus disorder prediction 382 471 - -
Mibi08g1577 516 Gene3D - 176 215 - -
Mibi08g1577 516 Pfam IQ calmodulin-binding motif 176 191 IPR000048 GO:0005515
Mibi08g1577 516 Pfam IQ calmodulin-binding motif 200 214 IPR000048 GO:0005515
Mibi08g1577 516 PANTHER IQ-DOMAIN 5-RELATED 62 450 - -
Mibi08g1577 516 ProSiteProfiles IQ motif profile. 173 201 IPR000048 GO:0005515
Mibi08g1577 516 SMART iq_5 172 194 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1577 Mibi-ChrMibi08 32190046 32195308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1577 62 482 IQD Protein Family AT3G49260 50.552 6.58e-96 297