Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1534 ATGGAGGTTGATGATGAGTATATTCAAGTATCAGAAGAAAGTTTCATCAGCTGCTCAGAGCCACCTCAGAATCAAAGGAAGAAAAACAAAGTGGTGAACAAGAAGAGATTTACTGATGAACAAATCAGATCATTGGAGTGCATATTTGAGTCAGAATCCAAGTTAGAGCCAAGGAAGAAGATCCAAGTGGCAAGAGATCTTGGGCTGCAACCTCGCCAAGTTGCCATATGGTTCCAGAACAGAAGAGCAAGAGGGAAATCCAAATGGATAGAGCAAGAGTACAGGAAGCTCAGAGATGAGTATGACAATTTAGTTTCCAGTTTTGAGTCCCTCAAGAAAGAGAAGGAGTCCTTAAAAGTAGAGTTGCAGAATCTGCATGATCTAATGGAGACATCTCAGAATGGTGAAGGGAAAAAGAGCACAGAATGGAGGAGTGAAGTAAAGCCAAGTTCTTCCTCTTATGAGGGTTTGGAGGTAAGAGACAGAGAAGGCATGCATTTACAAGATCAAAGTGAAATGAGCAAGAAGAATGGTTATTGTGAAGATGCAGAATACCAACTTCTGAGAATGGACGAGCTTGAAAAATGGTACAGTGGAGATCCAAGTGGCCCATTGGATCAACCTTGTAGTTCACAATGGTTGGATTTCTGGACTTGA 657 0.4155 MEVDDEYIQVSEESFISCSEPPQNQRKKNKVVNKKRFTDEQIRSLECIFESESKLEPRKKIQVARDLGLQPRQVAIWFQNRRARGKSKWIEQEYRKLRDEYDNLVSSFESLKKEKESLKVELQNLHDLMETSQNGEGKKSTEWRSEVKPSSSSYEGLEVRDREGMHLQDQSEMSKKNGYCEDAEYQLLRMDELEKWYSGDPSGPLDQPCSSQWLDFWT 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1534 218 FunFam Homeobox-leucine zipper protein ATHB-7 12 88 - -
Mibi08g1534 218 MobiDBLite consensus disorder prediction 155 175 - -
Mibi08g1534 218 Coils Coil 94 128 - -
Mibi08g1534 218 SMART HOX_1 26 92 IPR001356 GO:0003677
Mibi08g1534 218 SUPERFAMILY Homeodomain-like 19 87 IPR009057 -
Mibi08g1534 218 Pfam Homeodomain 34 86 IPR001356 GO:0003677
Mibi08g1534 218 CDD homeodomain 37 89 IPR001356 GO:0003677
Mibi08g1534 218 ProSiteProfiles 'Homeobox' domain profile. 28 88 IPR001356 GO:0003677
Mibi08g1534 218 Gene3D - 32 93 - -
Mibi08g1534 218 ProSitePatterns 'Homeobox' domain signature. 63 86 IPR017970 GO:0000981|GO:0006355
Mibi08g1534 218 PRINTS Lambda-repressor HTH signature 59 68 IPR000047 GO:0003677
Mibi08g1534 218 PRINTS Lambda-repressor HTH signature 68 84 IPR000047 GO:0003677
Mibi08g1534 218 MobiDBLite consensus disorder prediction 128 175 - -
Mibi08g1534 218 Pfam Homeobox associated leucine zipper 89 129 IPR003106 GO:0006355|GO:0043565
Mibi08g1534 218 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 24 171 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1534 Mibi-ChrMibi08 31757477 31758237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1534 10 121 Homeobox Transcription Factor Family AT2G46680 60.714 3.75e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi08g1534 Homeodomain 4.1e-16 CL0123