Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1532 ATGGGACATTGCTGCAGCAAAAACGTTTCTGTCGTCAACAACGAAACCGTCACAGCCGATCACCGCCCTAAATCTCCGCCGCCGCCGGTGACGACGGCGACAGTGTCCTTAGCTGGCGATGCGAGGAACACTCCTGCTCACTCCTTCTCCACTAGTCCCTTCCCAAGCCCTCTGCCGCCGGGGGTGGCGCCGTCGCCGTCGCCGGCGAGGACTCCGGGGAGGAAATTCCGGTGGCCTCTTCCTCCGCCGTCGCCGGCGAAGCCGATCATGGCGGCGTTGCTGAGACGGCAGGGGAAGCCGAAGCCGACGACGACGGATGGGCCGATTCCTGAGGAGGGAACTGAGGGCGGAGGAGGAGGAGGAGAGGGAGAGAGGGCTTTGGATAAGAGCTTTGGGTATGCGAAGAATATTGGGGCCAAGTATGAGCTTGGCAAAGAAGTGGGTCGAGGGCATTTTGGTCATACTTGCTGGGCTAAAGCTAAGAAGGGTGAGCTTAAGGGGCAATCTGTAGCTGTGAAAATCATATCTAAGGCTAAGATGACAACAGCAATATCAATTGAAGATGTAAGGAGGGAAGTGAAGATGTTGAAGGCCTTATCTGGACATAATAATTTGGTGAAATTTCATGATGTATTTGAGGATGCCAATAATGTCTACATAGTGATGGAATTGTGTGAGGGTGGAGAACTACTTGACAGAATTCTTTCAAGAGGTGGAAGATACACAGAGGATGATGCTAAAGCAATTCTTGTACAAATTCTAGATGTAGTTGCTTTTTGTCATCTCCAAGGAGTAGTTCACCGTGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGAAGATGATTCTCTGATGAAGGTCATCGATTTTGGTCTATCGGATTTTGTTAGGCCAGATCAACGGCTCAATGATATCGTCGGCAGTGCCTATTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTGGAAGCGGACTTGTGGAGCATCGGAGTTATTACATACATATTGTTATGCGGAAGCAGACCATTCTGGGCACGCACTGAATCAGGAATCTTCCGATCTGTGCTAAGAGCTAATCCTAACTTTGATGATTCACCTTGGCCATCGATATCACAAGAAGCCAAAGATTTTGTAAAGAGGCTTTTGAACAAGGATCATAGAAAAAGGATGACTGCTGCCCAAGCTCTAGCTCATCCATGGTTGAGAAATGAAAAACGTGCTATTCCATTAGACATTTCAATCTTCAAGTCAGTCAAGTCATATGTGCGGGCCACACCTTTAAAACGAGCAGCACTGAAGGCTCTCTCAAAGGCATTGACAGAATATGAACTTATCTTTTTAAGAGCACAATTTAGCCTATTGGAACCAAACAATGGTTTTGTTTCCCTTGACAATTTTAAAGCGGCTCTCATGAAAAATTCTACTGATACCATGAAGGAATCAAGGGTCCCGGACATTTTAAATCTGATGGATCCGCTGGCTTATAAAAAAATGGATTTTGAAGAGTTTTGTGCTGCCGCACTCAGTGTATACCAGCTCGAGGTTCATGAAGACTGGGAGAGAACTGCAGCCACTGCTTTTGAGCATTTCGAACGGGAAGGAAACAGAGTCATTTCAGTTGAAGAGTTGGCGCAGGAGATGAATCTTGGCCCTGCAGCTTACACAGTACTAAGTGACTGGATCAGGAAATCTGATGGAAAACTAAGTTTCAATGGATATACCAAGTACTTGCATGGCGTCACAATACGTAGCTCAAATCCAAGATCACGACAAGTATGA 1785 0.4644 MGHCCSKNVSVVNNETVTADHRPKSPPPPVTTATVSLAGDARNTPAHSFSTSPFPSPLPPGVAPSPSPARTPGRKFRWPLPPPSPAKPIMAALLRRQGKPKPTTTDGPIPEEGTEGGGGGGEGERALDKSFGYAKNIGAKYELGKEVGRGHFGHTCWAKAKKGELKGQSVAVKIISKAKMTTAISIEDVRREVKMLKALSGHNNLVKFHDVFEDANNVYIVMELCEGGELLDRILSRGGRYTEDDAKAILVQILDVVAFCHLQGVVHRDLKPENFLFVSKEDDSLMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISQEAKDFVKRLLNKDHRKRMTAAQALAHPWLRNEKRAIPLDISIFKSVKSYVRATPLKRAALKALSKALTEYELIFLRAQFSLLEPNNGFVSLDNFKAALMKNSTDTMKESRVPDILNLMDPLAYKKMDFEEFCAAALSVYQLEVHEDWERTAATAFEHFEREGNRVISVEELAQEMNLGPAAYTVLSDWIRKSDGKLSFNGYTKYLHGVTIRSSNPRSRQV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1532 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Mibi08g1532 594 ProSitePatterns Protein kinases ATP-binding region signature. 147 173 IPR017441 GO:0005524
Mibi08g1532 594 FunFam CDPK-related kinase 1 439 510 - -
Mibi08g1532 594 MobiDBLite consensus disorder prediction 36 51 - -
Mibi08g1532 594 MobiDBLite consensus disorder prediction 52 67 - -
Mibi08g1532 594 Gene3D Phosphorylase Kinase; domain 1 134 229 - -
Mibi08g1532 594 Gene3D Transferase(Phosphotransferase) domain 1 230 419 - -
Mibi08g1532 594 PANTHER SERINE/THREONINE-PROTEIN KINASE 126 567 - -
Mibi08g1532 594 CDD STKc_CAMK 140 402 - -
Mibi08g1532 594 Gene3D - 420 577 - -
Mibi08g1532 594 FunFam Calcium-dependent protein kinase SK5 313 408 - -
Mibi08g1532 594 SUPERFAMILY Protein kinase-like (PK-like) 140 425 IPR011009 -
Mibi08g1532 594 MobiDBLite consensus disorder prediction 15 85 - -
Mibi08g1532 594 FunFam CDPK-related kinase 3 133 305 - -
Mibi08g1532 594 MobiDBLite consensus disorder prediction 98 126 - -
Mibi08g1532 594 Pfam Protein kinase domain 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1532 594 ProSiteProfiles Protein kinase domain profile. 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1532 594 SUPERFAMILY EF-hand 436 581 IPR011992 -
Mibi08g1532 594 FunFam CDPK-related kinase 1 134 229 - -
Mibi08g1532 594 Gene3D - 442 510 - -
Mibi08g1532 594 SMART serkin_6 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1532 Mibi-ChrMibi08 31716749 31723290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1532 44 586 EF-hand Containing Proteins AT3G50530 61.592 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi08g1532 Pkinase 8.9e-71 CL0016