LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi08g1530	ATGATGATGAAGATGGTGCCTCATAATCACCACCACCGTCCATTATCGCCATTTGATAACGATTCCTGTGCTGGGGGTGGTGATGGAGATGGTCCCACCACAACATGTTCTTCTGTGTCTCTGTATAATAATACTACTACTATCACTCATCATCATCATCACTATGATATAAACGATCTTGTTAGTGGAGGATCTGCTTCTCCTGCTGCTGTTTCTGCAACAGCAGCTATTCATAGTGGAATTGGGAATTCTGCTGTAACAAATTTGCAGCCTTTTGACATTTCCACTCCCCCTGCCTTCAAATCCCCAGGGGCGATGGCGGCTTCTTTAGGATTCCCTTTCACAATTGCACAATGGAAGGAGCTTGAAAGGCAAGCTATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTCCTACTCTCCTAATCCCCTCTGCTCCTTACTCTCCCTTTGATGGTGGTTTTAATCTGAGGCTGTCTAGTGGGGGCACTGATCCAGAACCAGGGAGATGTAGGAGAACAGATGGGAAAAAATGGAGATGTTCTAGAGATGTGGCTCCTAATCACAAGTATTGTGAGCGTCATATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCAAACTGACGGCGCCGCCACCACCGACAGCAACAAAAACAGCAATAACCAGCAAAACAAAAGGGCTCGCCAAGATTTTCATCATCCTTATCCTGCAGATGTTGTGACTGTGGCTGTTTCTGATCCCACCATTACAAATGGTGGATCTTCTTCTTCTACTTCTCAGTTTCTTCAGTCTGATTCCAGTCAGACATTTCATGAATCTTCCCTTTCTCTTGACAAGTATGGTGTCAAAGCTGCTAATTTCGGATCTTTGCCTTCTGTGCCATCTGTTAGCCAACCCAGGGGCTTGGACTGGATGCTAAAGGGAGATCCCATTTCCATGGCTGCTTCTGATCCACAATGGCAGCCTCTGATTAAACAGAATTCCTGCAACAACAACAATAACGCCACCATTTCAAGTTATGAAGACGCTTTGTATCTCACTTCCTATGCGTCTTTCAACTCAGGACTTGACCAACAAAACAGACGTTGCTCTAATCTGTTCCTGAATCCTCTCCTTCCCATGGAGAATCACGAGTCCCTAAAGCCCAGGGGATTCATTGATGCATGGTCTAATGCTGAAACTGTGGAAAACAACAACGGCAACAGCGCCAGCAAAACTACAAATGCTAAACTTTCCCTTTCTTGTCTTGATCTATCAATGGGAGGTGGCTCCATGGTGGATGAAGAAATGGGTTCTATTCATATGGGTTTAGGCCTAATAGAGACTGATGGAGACACAGAACATGGTAACAAAACCCATCTTTCTAATTGGCTCACTCCTCCTGCACCATGGGCTGCTTCAACTACACCTGGTGGTCCCCTGGCTGAAGTTCTAAGGCCAAGCACGGTGGCTCCGACCACCGCCACCGCCACTGAGGCGGCGTCTGATCCGGCGTCTCCGGTCATGACGAATGCTGAATCTGGTAGTCCCCTGGCTACAATGGTGTCATCCCCATCTGGGGTTTTGCAGAAAACACTGGGATCAATGTCTGATTGTAGTAGTAATAGTAGCCCTACTGTGGCATCTTCAAGGGCCAATTCTGAGTTTGCCTTGCTCTTGTTCAATAAAGCAAACTAG	1692	0.4657	MMMKMVPHNHHHRPLSPFDNDSCAGGGDGDGPTTTCSSVSLYNNTTTITHHHHHYDINDLVSGGSASPAAVSATAAIHSGIGNSAVTNLQPFDISTPPAFKSPGAMAASLGFPFTIAQWKELERQAMIYKYMMASVPVPPTLLIPSAPYSPFDGGFNLRLSSGGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVQTDGAATTDSNKNSNNQQNKRARQDFHHPYPADVVTVAVSDPTITNGGSSSSTSQFLQSDSSQTFHESSLSLDKYGVKAANFGSLPSVPSVSQPRGLDWMLKGDPISMAASDPQWQPLIKQNSCNNNNNATISSYEDALYLTSYASFNSGLDQQNRRCSNLFLNPLLPMENHESLKPRGFIDAWSNAETVENNNGNSASKTTNAKLSLSCLDLSMGGGSMVDEEMGSIHMGLGLIETDGDTEHGNKTHLSNWLTPPAPWAASTTPGGPLAEVLRPSTVAPTTATATEAASDPASPVMTNAESGSPLATMVSSPSGVLQKTLGSMSDCSSNSSPTVASSRANSEFALLLFNKAN	563

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi08g1530	563	SMART	QLQ_2	112	148	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Mibi08g1530	563	MobiDBLite	consensus disorder prediction	211	230	-	-
	Mibi08g1530	563	MobiDBLite	consensus disorder prediction	251	270	-	-
	Mibi08g1530	563	MobiDBLite	consensus disorder prediction	193	239	-	-
	Mibi08g1530	563	ProSiteProfiles	QLQ domain profile.	113	148	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Mibi08g1530	563	PANTHER	GROWTH-REGULATING FACTOR 5	93	421	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Mibi08g1530	563	MobiDBLite	consensus disorder prediction	490	524	-	-
	Mibi08g1530	563	Pfam	QLQ	113	144	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Mibi08g1530	563	MobiDBLite	consensus disorder prediction	1	26	-	-
	Mibi08g1530	563	Pfam	WRC	167	209	IPR014977	-
	Mibi08g1530	563	ProSiteProfiles	WRC domain profile.	166	210	IPR014977	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi08g1530	Mibi-ChrMibi08	31673520	31675978	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi08g1530	113	554	GRF Transcription Factor Family	AT4G37740	32.000	1.77e-40	152

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRF	Mibi08g1530		WRC	6.1e-21	No_clan