Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1528 ATGGCGTCACCACCCCAAGTTATCACATGCAAAGGTGCTGTATGGTGGGGAGGAGGGGCGAAGGATGTGACGGTGGAAGACATAAAAGTCGATCCTCCTAAACCAACTGAAGTTCGTGTTAGGATGCTCTGTGCCAGTATCTGCCACACCGATCTCCTTTATGCCACAGGACATCCTAACCCTCTGTTTCCCAGAGTATTAGGGCATGAAGGAATTGGTGTTATTGAGAGCACTGGGGAGGGTGTGACAGATCTGAAAGTAGGCGATGTTGTGATTCCAACGTATATTGGTGAATGCAAAGAATGTGAGAACTGCATTTCAGAGGAATCCAACCTGTGCCTGAAATACCCAATATCATTAAGTGGCTTAATGATGGATAACACATCAAGAATGTCCATAAAAGGTCAAAAGTTATACCAACATTTTAGTTGTTCCACATTTGCAGAGTACATGGTATGTGAACAAAATTACCTTATCAAAGTTGATCCCAACATTGACCTCGCACATGCTAGCTTCCTCTCCTGTGGGTTTTCTACTGGTTTTGGAGCTGCTTGGAAGGAAGCCAAGGTTGAACCTGGATCTTCTGTTGCTGTGTTTGGCCTTGGTGGTGTTGGATTAGGGGCTATAAGTGCAGCCAAGATGAAGGGGGCAACTAAGATAATTGGGATTGACAAAAATGAGATGAAGAAATCAAAAGGAGAAGCTTTTGGGATGACAGATTTTATCAATCCTGATGCCTCTGATAAATCAGTTTCAGAGCTGGTCAAGGAACTGAGTGATGGAATGGGTGTGGATTATTGTTTGGAGTGCACTGGAGTTGCCCCTTTACTTAACGAAGCCTTGCAAGCCACAAAAAAGGGAAAAGGAAAGACAATAGCAATAGGTGCAGTATCTCAACAATTTGTGAGCATCGACTTCCTCTCTCTTATACTTGGGAGAACTTTAAAAGGTTCCATTTTTGGAGGATTAAAACCCAAATCTGATCTGCCCTTCCTAGTTGACAAATGCTTGAAAAAAGAGTTTCCTCTTGACGAACTTATTACTCATGAGGTGTCACTAGAAGAGACAGGCAAAGCATTGGAGCTGTTAAAACAAAGAGACTGTGTTAAAGTTATCATTAAGATATCAATGTGA 1134 0.425 MASPPQVITCKGAVWWGGGAKDVTVEDIKVDPPKPTEVRVRMLCASICHTDLLYATGHPNPLFPRVLGHEGIGVIESTGEGVTDLKVGDVVIPTYIGECKECENCISEESNLCLKYPISLSGLMMDNTSRMSIKGQKLYQHFSCSTFAEYMVCEQNYLIKVDPNIDLAHASFLSCGFSTGFGAAWKEAKVEPGSSVAVFGLGGVGLGAISAAKMKGATKIIGIDKNEMKKSKGEAFGMTDFINPDASDKSVSELVKELSDGMGVDYCLECTGVAPLLNEALQATKKGKGKTIAIGAVSQQFVSIDFLSLILGRTLKGSIFGGLKPKSDLPFLVDKCLKKEFPLDELITHEVSLEETGKALELLKQRDCVKVIIKISM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1528 377 Pfam Zinc-binding dehydrogenase 203 325 IPR013149 -
Mibi08g1528 377 SMART PKS_ER_names_mod 18 373 IPR020843 GO:0016491
Mibi08g1528 377 SUPERFAMILY GroES-like 326 373 IPR011032 -
Mibi08g1528 377 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Mibi08g1528 377 Gene3D - 14 370 - -
Mibi08g1528 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 338 IPR036291 -
Mibi08g1528 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Mibi08g1528 377 Gene3D - 180 318 - -
Mibi08g1528 377 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Mibi08g1528 377 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Mibi08g1528 377 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
Mibi08g1528 377 CDD liver_alcohol_DH_like 8 374 - -
Mibi08g1528 377 SUPERFAMILY GroES-like 5 191 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1528 Mibi-ChrMibi08 31647641 31654788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1528 37 315 Monolignol Biosynthesis Gene Families AT4G37980 29.078 3.18e-17 79.7