Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1524 ATGATGAATTTACACTTTCGTCTGATCTCATTCCTTCTCCTTTCCCTCCAACTCCACTTTCTTGGCATCCTCTGTGATGACAAAGATGCCCTTCTCTCATTCAAATTCCAAATCTCTGACCCAAGGAATTCTCTATCTAGCTGGAATTCCAATTCCTCCATCTGCTCTTGGCATGGAGTCTCCTGCTCCAAAAACACCAACAGAGTTCAATCTCTTAGCATACCAGGTCTTGGCCTTTCTGGCCATATTCCTTCTCAATTATCCATCCTAGATCAGCTCCAAGTTCTAGACTTGTCTTTGAATAATCTCACTGGCCAAATCCCTCCTGAATTTGGAAACTTTTCCTCTCTCAATAATCTTTCCTTGGCAAGAAACCATCTCTCTGGACAGATTCCCAGTGAGTTGGGAAATCTTGGTAAACTTTCTCAGCTTCAACTCTCTGAGAACTATTTCTCAGGGGATTTCCCCATTTCTATATTCAACATCTCTTCGTTAACCTTCTTATCTGTAACACAGAATAATCTTTCAGGAAAATTACCGCCACATATAGGCCATTCTCTTCCAAATCTGAGAGGCCTCTATCTGGCAAACAATACATTTCGGGGTGTGATTCCTATTTCCATATCCAATGCTTCACATCTCCAAGAAATCGATCTTTCTCACAATGAATTTCATGGTGACCTTCCCTTGTTCAGAAACATGAACAATCTCACCAGGCTAGTTCTTGGCAATAATCATCTCTCTTCTACAACATCAATAAATTCTGAGTTCTTTGACTCCCTTACAAACAGCCCAAAGCTAGAAATTCTGATGATCAACTCTAATCAGTTAGGAGGGGAGCTTCCAAAATCTATTGCAAATCTTTCAACCACTCTTGAAGATTTCTGTGTATCTTATAACTTATTTAGTGGAAGCATCCCTCTGGGTATAGGAAAATTGCAAAACCTTATGTCCCTATCTTTTGAAGTAAATCATTTCACAGGGGAGATACCCGGAGACTTAGGAGCGTTGAACAAACTGGGGAAACTTCTAATGCACAAAAACAATTTTTCTGGAGAAATCCCAGACATATTTGGCAATTTCACTCAACTATCCATCCTGGCGTTGCACAATAACAAGTTTTTTGGCAGAATTCCCTCCGGCATTGTACAGTGTGCAATGTTGAACTATTTGAACCTTCAAATGAATAACCTTCATGGTACCATACCAGTAGGCATTTTTAGGCTCTCTGGTTTAACCATCTTGTCCTTAGCAGGGAATACCCTACAAGGGTCCCTCCCTTTTGAAGTGAGTTCCATGCAGCAACTTCAGTACTTGGACTTGTCCAACAATCTTATGACTGGCTATATTCCCCAAGAAATAGATGGTTGCACAGGCTTGTTGATGCTTCAATTGTCAAGAAACAAGTTCAGTGGTTCAATACCTAGTACTTTGGGGAACTTGACATCATTGGAAACATTGGATTTATCTTCAAACAATCTCACAGGTCCCATCCCATCAACACTGGAAAAGCTTCAATATATGGTGAAGTTGAATTTGTCTTTCAACCATTTAGAAGGGGAGGTTCCAGAGAAAGGTGTTTTTATGAACCTTACCGAGGTTGCCCTCCAAGAAAACACCAACCTTTGTAGTCCTAACAAAGAATCTGCAGAGAGATTAAGAATTATTCAATGTGTCAAAGGTAAAAGTCACAACACTAGATTCTTACTCCCTCTCATACTTGCAGTTACTGGGGCCTCTGTTTTATGCATTTCCACCTCGTGCTTAGTATTGTGGGTGAAATGTTTTCGAAAGAAGGATGACAAAGCAAGTTTGCCCATTTTTCCTCTCAATGGATTTCCTCAACATTTATCATTTTCTGATATTCGAACTGCCACAAACAATTTTGCACCTGAAAACTTGATAGGAAATGGTGGGTTTGGTTTTGTGTACAAGGGTGTGTTCAGCATCAACCAATGTGAGACTACTCTTGCTGTGAAAGTGCTTGACTTGAAAGTAAGCAAGGCTTCTCAGAGTTTCATTGCAGAGTGTGAAGCTTTGAAGAACGTTAGGCATAGGAACCTGGTGAAGCTCATCACTTGTTGCTCTGGTATTGATTATAAAGGTGATGACTTTAAAGCTTTGGTTATGCCATTCATGACCAATGGTAATTTGGAAACGTGGTTGTATCCATTTGTAGACGAAGAATCAGGTGGGCCCACCTTGACCTTCTTGCAGAGATTGAATATTGCTATAGATATTGCTAATGCTATGGACTATTTACACTATGACTGTGACCCACCAGTAGTCCATTGCGATCTTAAACCCGGTAACATCTTATTAGATGAAACTATGGTTGCCCATGTTGGTGATTTTGGACTTGCGAGGCTTCTTTCTCAGGATTTATTGGAGTCTGTCACTCTAGGACTGAAGGGTACCATCGGCTACATTCCACCAGAATATGGTATGGGTGGAAAAGCTTCGACCTTGGGAGATGTGTTTAGTTTTGGGATTTTAGTGCTGGAGATGTTCATAGGAAAAAAGCCAACCGATGAGATGTTCAAGGAAGGTTTAAGCCTTGAAAAGTTTGCTGCGGCAATGGATGAGAACCAATTAATACTGAATGCAGTTGATGCAAAGCTTTTCAACGATTTTGAATGGTCATCAACACAAATCTCAAGCACTGGTTTTCAAAGTGAAGGAAGTAGTAACGACTATAATAGTCGTTTAACTCTGTGCCAGCGTAAAGCAGGGGAGTGTGTAGCTTCAGTGATAAGAGTTGGCCTGTCTTGTGCTGCTGAAGTCACCACAGATCGCTTGTCCATGAGAGAGGCCTCAAAAAAATTGCAGGCAATCAGGCAGACTCTTCTGGCTATATGA 2859 0.4085 MMNLHFRLISFLLLSLQLHFLGILCDDKDALLSFKFQISDPRNSLSSWNSNSSICSWHGVSCSKNTNRVQSLSIPGLGLSGHIPSQLSILDQLQVLDLSLNNLTGQIPPEFGNFSSLNNLSLARNHLSGQIPSELGNLGKLSQLQLSENYFSGDFPISIFNISSLTFLSVTQNNLSGKLPPHIGHSLPNLRGLYLANNTFRGVIPISISNASHLQEIDLSHNEFHGDLPLFRNMNNLTRLVLGNNHLSSTTSINSEFFDSLTNSPKLEILMINSNQLGGELPKSIANLSTTLEDFCVSYNLFSGSIPLGIGKLQNLMSLSFEVNHFTGEIPGDLGALNKLGKLLMHKNNFSGEIPDIFGNFTQLSILALHNNKFFGRIPSGIVQCAMLNYLNLQMNNLHGTIPVGIFRLSGLTILSLAGNTLQGSLPFEVSSMQQLQYLDLSNNLMTGYIPQEIDGCTGLLMLQLSRNKFSGSIPSTLGNLTSLETLDLSSNNLTGPIPSTLEKLQYMVKLNLSFNHLEGEVPEKGVFMNLTEVALQENTNLCSPNKESAERLRIIQCVKGKSHNTRFLLPLILAVTGASVLCISTSCLVLWVKCFRKKDDKASLPIFPLNGFPQHLSFSDIRTATNNFAPENLIGNGGFGFVYKGVFSINQCETTLAVKVLDLKVSKASQSFIAECEALKNVRHRNLVKLITCCSGIDYKGDDFKALVMPFMTNGNLETWLYPFVDEESGGPTLTFLQRLNIAIDIANAMDYLHYDCDPPVVHCDLKPGNILLDETMVAHVGDFGLARLLSQDLLESVTLGLKGTIGYIPPEYGMGGKASTLGDVFSFGILVLEMFIGKKPTDEMFKEGLSLEKFAAAMDENQLILNAVDAKLFNDFEWSSTQISSTGFQSEGSSNDYNSRLTLCQRKAGECVASVIRVGLSCAAEVTTDRLSMREASKKLQAIRQTLLAI 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1524 952 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Mibi08g1524 952 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Mibi08g1524 952 Gene3D Ribonuclease Inhibitor 233 553 IPR032675 -
Mibi08g1524 952 SUPERFAMILY L domain-like 292 546 - -
Mibi08g1524 952 FunFam LRR receptor-like serine/threonine-protein kinase EFR 603 712 - -
Mibi08g1524 952 SMART serkin_6 629 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1524 952 PRINTS Leucine-rich repeat signature 481 494 - -
Mibi08g1524 952 PRINTS Leucine-rich repeat signature 436 449 - -
Mibi08g1524 952 PANTHER OS04G0122200 PROTEIN 23 946 - -
Mibi08g1524 952 Pfam Protein tyrosine and serine/threonine kinase 633 849 IPR001245 GO:0004672|GO:0006468
Mibi08g1524 952 Gene3D Phosphorylase Kinase; domain 1 612 712 - -
Mibi08g1524 952 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Mibi08g1524 952 SMART LRR_typ_2 481 505 IPR003591 -
Mibi08g1524 952 SMART LRR_typ_2 90 113 IPR003591 -
Mibi08g1524 952 SMART LRR_typ_2 187 210 IPR003591 -
Mibi08g1524 952 SMART LRR_typ_2 361 385 IPR003591 -
Mibi08g1524 952 SMART LRR_typ_2 114 138 IPR003591 -
Mibi08g1524 952 SMART LRR_typ_2 234 260 IPR003591 -
Mibi08g1524 952 SMART LRR_typ_2 433 457 IPR003591 -
Mibi08g1524 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Mibi08g1524 952 FunFam LRR receptor-like serine/threonine-protein kinase EFR 253 563 - -
Mibi08g1524 952 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 713 952 - -
Mibi08g1524 952 SUPERFAMILY L domain-like 24 288 - -
Mibi08g1524 952 Pfam Leucine Rich Repeat 483 505 IPR001611 GO:0005515
Mibi08g1524 952 Gene3D Ribonuclease Inhibitor 185 232 IPR032675 -
Mibi08g1524 952 ProSitePatterns Protein kinases ATP-binding region signature. 635 660 IPR017441 GO:0005524
Mibi08g1524 952 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 185 - -
Mibi08g1524 952 ProSiteProfiles Leucine-rich repeat profile. 483 506 IPR001611 GO:0005515
Mibi08g1524 952 Gene3D Transferase(Phosphotransferase) domain 1 713 950 - -
Mibi08g1524 952 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Mibi08g1524 952 ProSiteProfiles Protein kinase domain profile. 629 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1524 952 SUPERFAMILY Protein kinase-like (PK-like) 605 940 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1524 Mibi-ChrMibi08 31614689 31617866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1524 65 947 Receptor kinase-like Gene Family AT3G47570 40.556 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi08g1524 PK_Tyr_Ser-Thr 1.7e-37 CL0016