Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1521 ATGTCTCATCAGAGGCAGAATAATAATAATAGGATGATGATGAGTGGAAGCAATGCAAAACAATTTGGTGACACAACTTACACAAAGATCTTCGTGGGAGGCTTGGCTTGGGAGACTAAAAGAGACTCTCTCAAACGCTATTTTGAGCAGTTTGGAGAGATCATAGAGGCTGTTGTTATCACTGACAGAAACACTGGTGCTTCCAAAGGCTATGGCTTTGTGACTTTCAAGGATCCTGAATCTGCAATGAGGGCTTGTCAGAATCCATATCCTTTGATTGATTCGAGGAGGGCTAATTGTAATCTTGCAGTTCTTGGTGCTCGCAAATTCAACTCATCATCTCCAACAGGAGCTGAGAAATTCAACACCAATTCATGGGCTATGGTGCCAATCCAATATCAAGGCTCCTCCTCTTCATATTACAATCAGCAAATGCCCCAATACACTTATCCCTTCCAACTACCCTATAGGTATCCTGCTTATCCTCCCTCACAAGAAATCTATGCAATGAACTACTATAATGTTTATGGAGGGAATCAGCTTCCAATTCGATGGCGTCCAGCAATGTACCAACCATATTATGGGATAAGTAATCCAATGAGATTACCAGCAGAAGCAGTAATAATGGGGAAGAAGACACAGTACTCTGATATGCCACCACACCAGGAAATGTTGGCAGTTGTTGGAGTACCACCACCAGAACCTATTTCAGTTTCTTCCTCAATACCCACCTCTGGACTAGTGACAGCAACAGTTTCTGCTGCAGCCAAGATAGGAGCATCCCCCGAACACAAATCTTCAGCTTAG 807 0.4312 MSHQRQNNNNRMMMSGSNAKQFGDTTYTKIFVGGLAWETKRDSLKRYFEQFGEIIEAVVITDRNTGASKGYGFVTFKDPESAMRACQNPYPLIDSRRANCNLAVLGARKFNSSSPTGAEKFNTNSWAMVPIQYQGSSSSYYNQQMPQYTYPFQLPYRYPAYPPSQEIYAMNYYNVYGGNQLPIRWRPAMYQPYYGISNPMRLPAEAVIMGKKTQYSDMPPHQEMLAVVGVPPPEPISVSSSIPTSGLVTATVSAAAKIGASPEHKSSA 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1521 268 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 105 IPR000504 GO:0003723
Mibi08g1521 268 PANTHER BOULE-RELATED 16 223 IPR037366 -
Mibi08g1521 268 CDD RRM_RBM24_RBM38_like 28 103 - -
Mibi08g1521 268 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 87 IPR000504 GO:0003723
Mibi08g1521 268 SUPERFAMILY RNA-binding domain, RBD 14 103 IPR035979 GO:0003676
Mibi08g1521 268 Gene3D - 1 118 IPR012677 -
Mibi08g1521 268 SMART rrm1_1 29 101 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1521 Mibi-ChrMibi08 31550124 31551502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1521 24 161 C2H2 Transcription Factor Family AT2G19380 31.847 3.89e-16 76.3