Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1511 ATGGGCGAGGTTGTGTTGAGTCATGAGAAGGTTCTGGAAGCGACGATGGTAGATATGGAGGACGATAAGCGGAAGGAGATGACGGAGGAGGAAGAGAGTGGAACAGAGAGTAAGGATGAGGAATTGGATAATGGATTGATGAAGTGGAAGGAATTCTTGCCTAGGATGACATTAAGAGTGTTGTTGGCTGAAGCTGATGATTCTACACGCCAGATTATAGCTGCGCTTCTTAGGAAATGTAGCTACAAAGTGGCTGCTGTTTCTGATGGCTTGAAGGCATGGGAAATACTGAAGGGAAGGCCACACAATGTTGATCTGATACTTACAGAAGTAGATATGCCATCAATATCTGGCTATAGTCTTCTCACATTAATTATGGAGCATGAAGTTTGCAAAAACATTCCTGTTATAATGATGTCTTCGCATGATTCAATCAACACAGTCTACAAATGCATGTTGAGAGGTGCAGCTGACTACCTTGTTAAGCCCCTTAGAAAAAATGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCTTCAACCTCTGGTGTAAACGGTATTGAAGATGAGAGTGTTGCAGAACCAAAGGCTGAAGCCACTGCTGAAAACTATGCGACAGATAATCATTCAAGTGGCAATGCTGCATGCATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCTTGTGGAAAGCTTGATTTGGAAGCTGAGAGTCCTTTGGAGGATCATGTGTATGAATCTTCCCAACTAAAACATGGCAAAATATACCCTAGAGAAACAAAGACGCAGGAGGTCGAAATGTGCATTCAAGTAGGCCAGACCTTGACTTGGCATGACAATCACACAGGAGGATTAACGGTTGAGATCCGCAAAAATGCAGCTTATGGGAAGGATGGTGACCGAGAACATGTTAGTAGTCCAGACGCGGGTCGGGAGGCTTATGACAATCACAATGTTCACATTAACTCTTCAAAGGAAGCTATTGACTTGATTGGAACATTTCAAAATCGTCCAAATAGCAGTCACAGAAGTTCCTCAGTCAACTGCACGGGCAAGTTTGACTTTTCTCCTCAACTGGATCTTTCCTTAAGAGGATCTCATCCCAGCAACTTTGAGAATGAAGCCACTAAAGAGAGGCATGCCTTGATGCATTCTAGTGGCTCAGCTTTCAGACGATATACTAATAGGCAAACACAAGCTCTGCCTGCAGTGTCCACCAATCAAGAAAGAGAAAAGAGAACAAATAGTGAGAACAATATCTCAAATAATGTAGGCTATAACTCGGAAGTTTCAATGCCTAATTTGCAAGGAAGTCTTGTGTCTTCAGCTACACCACAGTCAAAAGAATCTGAGCTTACCACTTCCCCCTCCCATTGTAGGCCTTCACTTCCAATCGCAGTAAAAGCTTTAAGGTACGAGAATCCACGCACTGCCTATGGTTCTGCCCTTCCTCCTATGTTTTGTACACAGTCAGGCCCTGCGGCATCAACCTTAAATCCAGAATTGGTTCAACATCGTGAACCAACCTTTCAAGTGAATGGTTTTTATCAGTCAAATGCCAGAGAAAGCAGCTTAGAGCAGCTTTATGAACCTCAAGGTCTAGATGGAAACAACACAACAAACCACATAATGTACATGCAGGAAGGCAATTTGGAACATTTGGAGGATCGAAGAAGACATATTTCTCCCACAACTGGTCAAAGTGCCTGCACTAACAAAAACGCCGACCAGGTCCCTTTAGCCCGGGCAGCTTCAGAGAGCATGGCAGAAGACCTCACAAATAATGGGAGTTCTCATCGGTCTATCCAAAGAGAAGTGGCCCTAAACAAATTTCGCTTGAAACGTAAAGAGAGGTGCTTTGAAAAGAAGGTTCGGTATGAAAGCAGAAAGAAACTTGCAGAGCAGCGTCCTAGAGTGAAGGGACAATTTGTTCGTCAGGTGCAGCAAGATTCCCAGGCTGCAGAAAAACATGGTTGA 1998 0.4354 MGEVVLSHEKVLEATMVDMEDDKRKEMTEEEESGTESKDEELDNGLMKWKEFLPRMTLRVLLAEADDSTRQIIAALLRKCSYKVAAVSDGLKAWEILKGRPHNVDLILTEVDMPSISGYSLLTLIMEHEVCKNIPVIMMSSHDSINTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTSGVNGIEDESVAEPKAEATAENYATDNHSSGNAACIQRNKELIEKGSDAQSSCGKLDLEAESPLEDHVYESSQLKHGKIYPRETKTQEVEMCIQVGQTLTWHDNHTGGLTVEIRKNAAYGKDGDREHVSSPDAGREAYDNHNVHINSSKEAIDLIGTFQNRPNSSHRSSSVNCTGKFDFSPQLDLSLRGSHPSNFENEATKERHALMHSSGSAFRRYTNRQTQALPAVSTNQEREKRTNSENNISNNVGYNSEVSMPNLQGSLVSSATPQSKESELTTSPSHCRPSLPIAVKALRYENPRTAYGSALPPMFCTQSGPAASTLNPELVQHREPTFQVNGFYQSNARESSLEQLYEPQGLDGNNTTNHIMYMQEGNLEHLEDRRRHISPTTGQSACTNKNADQVPLARAASESMAEDLTNNGSSHRSIQREVALNKFRLKRKERCFEKKVRYESRKKLAEQRPRVKGQFVRQVQQDSQAAEKHG 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1511 665 MobiDBLite consensus disorder prediction 424 466 - -
Mibi08g1511 665 MobiDBLite consensus disorder prediction 636 665 - -
Mibi08g1511 665 CDD psREC_PRR 60 163 - -
Mibi08g1511 665 ProSiteProfiles Response regulatory domain profile. 59 177 IPR001789 GO:0000160
Mibi08g1511 665 SUPERFAMILY CheY-like 58 184 IPR011006 -
Mibi08g1511 665 ProSiteProfiles CCT domain profile. 611 653 IPR010402 GO:0005515
Mibi08g1511 665 MobiDBLite consensus disorder prediction 406 466 - -
Mibi08g1511 665 MobiDBLite consensus disorder prediction 17 41 - -
Mibi08g1511 665 Pfam CCT motif 611 653 IPR010402 GO:0005515
Mibi08g1511 665 Gene3D - 56 278 - -
Mibi08g1511 665 SMART REC_2 58 173 IPR001789 GO:0000160
Mibi08g1511 665 Pfam Response regulator receiver domain 60 171 IPR001789 GO:0000160
Mibi08g1511 665 MobiDBLite consensus disorder prediction 17 32 - -
Mibi08g1511 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 58 374 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1511 Mibi-ChrMibi08 31471994 31476150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1511 38 655 Response Regulator Gene Family AT5G24470 41.614 1.33e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mibi08g1511 Response_reg 7.8e-22 CL0304