Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1495 ATGGGTGCGGTTACTAACTATCATCCGCCGCCGCGAGCGGATGAGGCGGCGGTGTTGCCTCTGAATTCGCTGCCTTTGGGATTTAGATTTCGGCCCACCGATGAGGAGCTTGTTGATTATTACCTCAGACAGAAGATTAATGGTTTTGGTGATGACGTTTGGGTTATTCGTGAAATCGATGTTTGCAAATGGGAGCCCTGGGATTTGCCTGATTTATCGGTGATAAGGAACAAGGATCCAGAGTGGTTCTTCTTCTGCCCTCAGGATCGCAAGTACCCTAATGGCCATAGATTAAACCGAGCAACAAATCAAGGGTATTGGAAGGCAACCGGCAAGGATCGCAGAATTAAGTCTGGGTCCAATCAGATTGGAATGAAGAAGACTTTAGTCTTCTATAGTGGTCGTGCTCCCAAGGGGAAGAGGACCCATTGGGTTATGCATGAGTACCGTCCCACTATTAAGGAGCTTGATGGTACCAATCCTGGTCAGAATGCCTATGTCCTCTGTCGTTTGTTCAGGAAACAAGATGAGAGTGTTGAAGTTGACGAAGCAGAACGGACTGCGTCAACTCCTACTGCTGCTAATTCCTCTCCAGAGGAAATACAGTCTGATGTAGGTATAGCTGTGGTATCTCCATCCCTGGCTCCAGAAGATGATAAGCGGAAGATAGTTCCATACTGTGTTTCTGAGAACACTGAAGAAACCACATCTAACGTAATAACATCGGCTGAGTGCCATAGTGATGAGGGTGATGCTTACGAGGCACCAAATCAAAATGTAGATAACACAGCTTTGGAGGAGGATCCACTGGCTAACCTTGGTATATTTGATGAACCAATAACTGGGCCATTTGATGACAAGATGTTCTCCCCATTACATGTGCATATGCCATCAGAATTTTATGATCCAGTTTGCAATGAATCAGAAGGTCAATGTGGGCTGCAATTTCCATATGGTACAAATTGGACAAATATTTCAGACTTCTTTGACTCATACAGCAATTGTGGTGAATTGTCTTGTGAGGACTGCATCGGTCGAAAGCCAACCTCTGGCATTTCAAACCCTTGGGACAATGGATCTGGCACTGACTCAGATGTGAAAACCACCAATATGCTGTATTGGCAAGCATTGCAAGCTGCGCATCCTGAGGAGCAATCTGACAAGAGGGTTCCTTCCATGATAGATACAGCTTCAGAATTTAACAGAACCAATGCCTCTGACCTCAGTAGTTATGAGCAGAAGAGCAATATGGGGATATTCCGAAGTCATCCTCAGATGGCTTTGCCATCTGATGTTGCTTTTGACCCAGTCTATGGTGTATTTAATGGTTGTCAAGAACCAAGAAACTACAATACAGTTGTTGGCGGCGATAATGGTACTGGAATCAGGAGGAAGCCTCGCCAAGTGCGAGATGAAGTAAACATGCTCCCTATGAACCAAGGACAAGGTACTGCTGCAAGAAGAATACGTCTAGTACGTGAATTTCCACCTAATTCCAATGAAGTTGAGGAAGATGGGAAATGTGCTCAAGAAAACCATGATTCAAAGCCAGTTATCACAAGGGAAACTGAAGCCTCAGAAAATGACGCTGCCGAAGAGGATTCTACTATTACTGAGACTGGGAGTGAACCGTGGACTCCTGAGTCAGTTGACAGTAATAAGATTTCTCAGCTACTTGATACAAATGAAGATTCTCTTTCAGGTTCAGAAGAGACCTTGCAGTGCAAATCAGTTCAGTGCACATCGAAGGCTTCTTCTCGAGCAACAATCTGGTCATCTACATTGGTATTCTCTGTCAGTTTAATGGCAGCAGCAGTATTCATAGCTAACATATGGGGAATTATTGAATTTTGA 1854 0.445 MGAVTNYHPPPRADEAAVLPLNSLPLGFRFRPTDEELVDYYLRQKINGFGDDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNQGYWKATGKDRRIKSGSNQIGMKKTLVFYSGRAPKGKRTHWVMHEYRPTIKELDGTNPGQNAYVLCRLFRKQDESVEVDEAERTASTPTAANSSPEEIQSDVGIAVVSPSLAPEDDKRKIVPYCVSENTEETTSNVITSAECHSDEGDAYEAPNQNVDNTALEEDPLANLGIFDEPITGPFDDKMFSPLHVHMPSEFYDPVCNESEGQCGLQFPYGTNWTNISDFFDSYSNCGELSCEDCIGRKPTSGISNPWDNGSGTDSDVKTTNMLYWQALQAAHPEEQSDKRVPSMIDTASEFNRTNASDLSSYEQKSNMGIFRSHPQMALPSDVAFDPVYGVFNGCQEPRNYNTVVGGDNGTGIRRKPRQVRDEVNMLPMNQGQGTAARRIRLVREFPPNSNEVEEDGKCAQENHDSKPVITRETEASENDAAEEDSTITETGSEPWTPESVDSNKISQLLDTNEDSLSGSEETLQCKSVQCTSKASSRATIWSSTLVFSVSLMAAAVFIANIWGIIEF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1495 617 MobiDBLite consensus disorder prediction 498 552 - -
Mibi08g1495 617 ProSiteProfiles NAC domain profile. 24 174 IPR003441 GO:0003677|GO:0006355
Mibi08g1495 617 SUPERFAMILY NAC domain 17 174 IPR036093 GO:0003677|GO:0006355
Mibi08g1495 617 MobiDBLite consensus disorder prediction 498 526 - -
Mibi08g1495 617 FunFam Nac domain-containing protein 86 33 177 - -
Mibi08g1495 617 MobiDBLite consensus disorder prediction 537 552 - -
Mibi08g1495 617 Pfam No apical meristem (NAM) protein 25 150 IPR003441 GO:0003677|GO:0006355
Mibi08g1495 617 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 240 - -
Mibi08g1495 617 MobiDBLite consensus disorder prediction 179 201 - -
Mibi08g1495 617 Gene3D NAC domain 33 179 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1495 Mibi-ChrMibi08 31287759 31290653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1495 17 491 NAC Transcription Factor Family AT4G35580 41.615 4.81e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi08g1495 NAM 4.1e-35 No_clan