Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1491 ATGGCTTCCTTCTATTTCATCATCATCTTCTTTTGCTTATTTACTCTTCTAGCTTCAATTACAGAACACCCAGTTATTGCTTATTCATCATCCACCATCAATGTAACAAAACAATTCTACTTCTCCGATTTCAGCACAAGCAATAACTCTAGAATCCTCAATGATTTAAAGCTCCTAGGAAGTGCCAAATTCTCAGAACAAAAGGGTGCTCTTCAAATTCCAGATGAATCTTCAGACATCAGATATCAAGCAGGAAGATGCATTTACTCTTACCCGATTCGCCTTCTAGATCCAGAAACACAAACCCCAGCCTCATTTCAAACCAGTTTCTCTTTTCAGTTCATCAATCACAGCATTATCTCAGACCAAGAAAATGATTCTTATTATGGTGGAAGTGGCTTCACTTTCATCATCGTCCCTGATGAGTTCACTGTGGGAAGACCAGGTCCATGGCTTGCTATGCTTAATGATGCTTGCCAAGATAATTACAAAGCGGTGGCCATAGAATTCGACACTAGAATGAACCCAGAATTCGGAGATCCAAACGACAACCATGTTGGCATCAATTTAGGTACCATATTATCCTCTAAAACCATCAATGTTTCTGATTTAGGAATTAACTTTAAGGATGGTTTTGTTCATCATGCTTGGATTACCTATGATGGTCTCAGAAAAATAATGGACATTCGTTTAGGATCAGCAAACCAAGAAGATTATCCTTATAAGCCAATCTTCTCAGAATTTGTGGATCTCTCACCATTTTTAAATGAGTATATGTTTGTGGGATTCTCTGCTTCAACAGGAAACCATACCCAAATCCACAATATACTTTCATGGAACTTCACTTCCACATCTCAAGCTTCTCTTCGATTTCCCTCATCTAATACCTGCCAGGGTAAGATCTTACTTCAAAGTTCCCCTACAACTCCTAATAGTGATAATGGTTCCTCTAAATTTGAGCCTTCTCGCAGCTTTTTAATCTTTGTAGCTGTAGTGGGTTTGGTTCTTGCCTTTGTTCTTGGCTTTTACTTCAATAGTAAACGCAGAAAGAATGATGAAAAATCAATCTTTCCAAGACCCCCAAATAAGCCTCGTCGCTTTGCCTTCTCTGAGATTTCCTCTGCTACTAGATCCTTCAATGAAGTAGAGATTTTGGGTAGTGATTCTAAGGGGGTGTACTACTGTGGGAAGCTTTCCAACGGCATAAGAATTGCTCTGAAAAGATTCTCCTCTCAGTTTCTGAGCTCATATGGATCAGATCATAAGAAAAGATTGTTGAAGGAAATCAAATCTATAAGCCAATTTCGCCACCCAAATTTGATGCCCATAAGAGGATGGTGCCAAGACAGGCATGAAACCATGGTGGTCTATGATTTCTTCCCAAATGGCAGCCTTGACAAGTGGCTATTTGATGACAATGTTCTTCCATGGACTCGTAGATTCAAGATCATAAAAGATGTAGCCGATGGCTTGTGCTTCCTCCACTCTAAGCAACTAGCCCATAAGAACTTGAAATGCAGCAGTGTCTTTCTTGATTTGAACTACAGAGCAATCTTGGGTGACTTTGGGTTTGTACTTTTAGAATCAGAATCAAGGCAATTCGAGTCCACTGTGTGTCGAGGCGTCGATGTGTTTGAATTCGGAGTGTTTGTGTTGGAAGTGATAGCAGGAAGGCGCAGGGCAGAGGATGAAGAGAATGTAAAACCAGAAGCCAAAAACTTGCTGGACTATGCTTGGAACTTGCATGAGATTGATGAGAAAGTGAAAGTGGTGGATAGAAGAATGGGGTCATTGATAAACTTGGAGCAAGCAAATCGTGTACTGGAAATTGGGCTGCTTTGTACATTGAATGAGAACAAAGGAAGGCCAAGTATGGAGCAAGTGGTAGAGTTTCTGAACATGGAGATACCAATCCCTAAGCTGCCAACAACTCGCCCTGTTGCCTTGTTTCCTTATAGCAGTACCAATGCAGGTCTCTGTAATACCTACTCTTGCACCACCTTGAAGTGA 2010 0.4065 MASFYFIIIFFCLFTLLASITEHPVIAYSSSTINVTKQFYFSDFSTSNNSRILNDLKLLGSAKFSEQKGALQIPDESSDIRYQAGRCIYSYPIRLLDPETQTPASFQTSFSFQFINHSIISDQENDSYYGGSGFTFIIVPDEFTVGRPGPWLAMLNDACQDNYKAVAIEFDTRMNPEFGDPNDNHVGINLGTILSSKTINVSDLGINFKDGFVHHAWITYDGLRKIMDIRLGSANQEDYPYKPIFSEFVDLSPFLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQASLRFPSSNTCQGKILLQSSPTTPNSDNGSSKFEPSRSFLIFVAVVGLVLAFVLGFYFNSKRRKNDEKSIFPRPPNKPRRFAFSEISSATRSFNEVEILGSDSKGVYYCGKLSNGIRIALKRFSSQFLSSYGSDHKKRLLKEIKSISQFRHPNLMPIRGWCQDRHETMVVYDFFPNGSLDKWLFDDNVLPWTRRFKIIKDVADGLCFLHSKQLAHKNLKCSSVFLDLNYRAILGDFGFVLLESESRQFESTVCRGVDVFEFGVFVLEVIAGRRRAEDEENVKPEAKNLLDYAWNLHEIDEKVKVVDRRMGSLINLEQANRVLEIGLLCTLNENKGRPSMEQVVEFLNMEIPIPKLPTTRPVALFPYSSTNAGLCNTYSCTTLK 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1491 669 Gene3D - 35 288 - -
Mibi08g1491 669 ProSiteProfiles Protein kinase domain profile. 379 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1491 669 PANTHER - 67 635 - -
Mibi08g1491 669 SUPERFAMILY Protein kinase-like (PK-like) 355 632 IPR011009 -
Mibi08g1491 669 Pfam Protein tyrosine and serine/threonine kinase 390 526 IPR001245 GO:0004672|GO:0006468
Mibi08g1491 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 285 IPR013320 -
Mibi08g1491 669 Pfam Legume lectin domain 37 288 IPR001220 GO:0030246
Mibi08g1491 669 Gene3D Phosphorylase Kinase; domain 1 341 459 - -
Mibi08g1491 669 Gene3D Transferase(Phosphotransferase) domain 1 460 653 - -
Mibi08g1491 669 CDD lectin_legume_LecRK_Arcelin_ConA 38 284 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1491 Mibi-ChrMibi08 31216545 31218554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1491 6 644 Receptor kinase-like Gene Family AT5G55830 31.725 2.17e-95 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi08g1491 Lectin_legB 1.6e-53 CL0004