Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1483 ATGGAACGGAGCAGATCTTTTAGGGTGATGAATAGAGAAGTAGAGGACGAGTTTGAAGAAGAAGAAGATGAACAGGGGAAGAGTAAGAGAGAAGTGAAAAGCTTGTCGTTTTTTACACTGTTGAGTTATGCTGATTCAGTGGATTGGATTCTAATGGCGTTGGGAACATTGGGTTCTGTAATTCATGGCATGGCTTTCCCTGTTGGTTATCTCTTGCTCGGAATAGCTCTTAATACTTTTGGCACCAATATCAATGATAGTGATGCCATGGCTAGAGCTCTTAAAGAAAAGGTTGTTCCCTATGTGTGGTACATGGCCATCGCCACCTTTCCTGCTGGGATACTTGAGACGGGGTGTTGGATGTATACAAGTGAAAGACAAGTGGCTAGGCTAAGATTAGCATACTTAAGAGCAGTACTAAGCCAAGAGATTGGAGCATTTGACACAGAATTAACAAGTGGCAAAATCATCAATGGAATCAGCAACCACATGAGTATCATCCAAGATGCTATTGGCGAGAAGTTGGGTCACTTCACCTCATGCTTCGCTACTTTCTTCTCTGGTCTTGTGATTGCTGCATATTGCACCTGGGAAATTGCACTATTATGTCTAGTGGTTGTTCCTCTTATTCTTCTTATAGGAGCCACTTACACCAAGAAAATGAACAACATTTCAACCACCAAAATGTTTTACCAGTCTGAAGCCACAGCTATGGTTGAACAGACAATATCACAAATAAAAACGGTATATGCATTTGTTGGGGAGAGCTCTGCAATGAAATCCTTCACAGAAAACATGGAAAAGCTTTATATTATAAGCAAAGGAGAGGCACTAATAAAGGGTGTTGGAACAGGAATGTTCCAAACTGTGAGTTTTGTTTCATGGGCTCTTATCGTGTGGGTTGGAGCTGTTGTAGTCACAGCTCATAGAGCAACAGGAGGAGATATTATTACTGCAGTCATGAGCATTCTCTTCGGTGCAATATATTTGACTTATGCTGCACCAGATATGCAAATATTCAATCAGGCCAAAGCAGCAGGATATGAGGTTTTCCAAGTGATCCAGAGAAAGCCACTCATAAGTAATGAATCTGAAGGGAAGAAACCTCTGAAGATTGAAGGCTTTATTGAGATACGCGATGTTCACTTTTCATATCCATCACGCCCAGAGAAACCAATTCTTCGAGGATTCTCATTGTCAATAGCTGCAGGAAAGACAGTAGCATTAGTTGGTAGCAGTGGATGTGGAAAGAGTACTGTCATCTCCTTAGTTTCCAGATTTTATGAAGCCTCAAAAGGAGAAATTTTTATTGATCACCATAATATAAAGGATCTTGATTTGAAGTTCCTTAGAAGAAACATAGGAGCTGTTTCCCAAGAACCTTCACTTTTCACAGGCACTATCAAAGATAACTTGAAGGTGGGAAAAATGGAAGCAAATGATCAAGAGATAGAGAGTGCAGCAGAAATGTCAAATGCACACTCTTTCATATCACAACTTCCAGAGCAGTACCTAACAGAGGTAGGTCAAAGGGGTGTCCAATTATCAGGAGGCCAAAAACAAAGGATAGCAATAGCAAGGGCCATTCTGAAAAACCCACCAATTCTTTTGCTTGATGAAGCTACAAGTGCCTTGGACTCAGAATCAGAAAAGCTGGTTCAAGAGGCACTTGAAAAAGCCATGAGTGGAAGGACTGTGATCATGATTGCACACAGATTATCAACTGTGGTGAATTCAGATATAATTGTTGTTGTGCAGAATGGACAGGTCTCAGAAATGGGAACGCATTACAGATTGCTAGAGACAAGCCCATTCTACAACGCACTATTCAACATGCAGAACCTTGAACCACTTCCTGAATCGAGACCTTCAAGTTCAAAAGATGAAACTTCAAGTGTCATAAAGGAAGAATCCTTTCAAGAAATTAGATCACAAGAGAAGCAACTTGACGAGATGCTAGAAATTCTTAGCCAGAAGTCAATGGAAGAAAAACAGAATAGCAGAAAAGGAACAAGTAAATTTTTTAGAATCTGGTATGGTCTAAGAAAAAGAGAGCTCGCAAAGACAGCAATTGGAGCATTTGCTGCAGCTTTTTCCGGTATCTCGAAGCCAGTTTTTGGATTCTACATCATCACCATTGGAGTAGCATACTTTGGTCACGATGCAAAACGGAAAGTCGCATTGTATTCTATTATCTTCGCAGCAATAGGGTTACTTTCCTTATTTAGTCACACCCTCCAACATTACTTCTTTGGAATCATTGGAGAAAAGGCCATGGGAAATATCAGACGAGCTCTTTATTCAGGAGTGCTTCGAAACGAGGTTGGCTGGTTTGACAAACCAGAGAACAGTGTGGGATCACTAACTTCACGCATCATCAGTGACACAGCCATGGTCAAAGTCATAATTGCTGATCGAATGTCTGTAATTGTCCAATGCATTTCCTCTGTACTTATAGCAACAGTGGTGAGCATGGTTGTTAACTGGAGAATGGGCTTAGTATCTTGGGCAGTGATGCCCTGCCACTTCATAGGTGGACTAGTTCAAGCCAAGTCTGCTAAAGGATTCTCAGGAGACAACTCTGCTGCACACTCTGAACTCGTTGCTCTTACCTCGGAGTCCACAACCAACATTAGAACTGTCGCATCATTTTGCCATGAAGAGCATGTGTTGAGGAAAGCCAAAGCATCCTTAGACATCCCAAAGAAGAAGTACAGAAATGAAAGCATCAAATATGGGATCATCCAAGGTTTCTCTATATTCTTATGGAATGTTGCTCATGCTGTTGCTTTATGGTACACAGCAATCCTGGTCGAAAGACGACAAGCCTCCTTTGAAAATGGCATAAGATCTTACCAGATTTTCTCTCTCACTGTCCCTTCCATCACAGAGTTATACACACTGATCCCCACTGTGATCTCTGCTATTAGTATACTTACACCAGCATTCCAAACCCTTGACCGTCAAACTGAGATTGAACCAGATGTTCCAGAAGATATAGAGCCAAAGGCGATACAAGGAAATATTGAATTCAAAGGAGTGAAGTTCAACTATCCGTTGAGACCTGAGGTGACTGTTCTTGACAACTTCAGTTTGAAAATAAAAGCTGGATCAAAGGTGGCTTTTGTAGGGCCTAGTGGGGCTGGGAAATCCTCTGTATTGGCCCTTTTACTCAGATTTTATGATCCAAGAGAGGGGCAAGTGCTCATTGATGGGAAAGACATAAAGGATTATAATCTAAGATGGTTGAGGAAACAGATAGGGTTGGTACAACAAGAGCCAATGCTTTTTAACTGCTCTATAAGAGAGAATATTTGCTATGGCAATAATGAAGCTTCTGAAAGTGAAATAGTGGAGGTGTCTAGAGAAGCAAACATTCATGAATTTGTGAGTAATCTACCGAATGGGTATAACACTGTGGTTGGGGAGAAAGGATGCCAGCTTTCAGGAGGGCAAAAGCAGAGAATAGCAATCGCTAGAACATTGTTAAAGAAGCCAGCCATTTTGCTTCTTGATGAAGCAACAAGTGCTCTTGATGCTGAGTCTGAAAGAACAGTGATAAGTGCAATGAAGGCAATAAGTCAAAAGGGAGGGAGTGGGTTGAACTCAAGAACCACTCAGATCACAATAGCTCATAGGCTTTCCACTGTTATAAACTCAGATACCATAATTGTGATGGAAAAAGGCAAAATCGTGGAGATGGGGTCCCACTCAAACTTGATAGAAGCAGAAACAGGGCTTTACTCAAGGTTATTCAGGTTGCAGAGCTTTGAAGAAAGCTGA 3783 0.4129 MERSRSFRVMNREVEDEFEEEEDEQGKSKREVKSLSFFTLLSYADSVDWILMALGTLGSVIHGMAFPVGYLLLGIALNTFGTNINDSDAMARALKEKVVPYVWYMAIATFPAGILETGCWMYTSERQVARLRLAYLRAVLSQEIGAFDTELTSGKIINGISNHMSIIQDAIGEKLGHFTSCFATFFSGLVIAAYCTWEIALLCLVVVPLILLIGATYTKKMNNISTTKMFYQSEATAMVEQTISQIKTVYAFVGESSAMKSFTENMEKLYIISKGEALIKGVGTGMFQTVSFVSWALIVWVGAVVVTAHRATGGDIITAVMSILFGAIYLTYAAPDMQIFNQAKAAGYEVFQVIQRKPLISNESEGKKPLKIEGFIEIRDVHFSYPSRPEKPILRGFSLSIAAGKTVALVGSSGCGKSTVISLVSRFYEASKGEIFIDHHNIKDLDLKFLRRNIGAVSQEPSLFTGTIKDNLKVGKMEANDQEIESAAEMSNAHSFISQLPEQYLTEVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDSESEKLVQEALEKAMSGRTVIMIAHRLSTVVNSDIIVVVQNGQVSEMGTHYRLLETSPFYNALFNMQNLEPLPESRPSSSKDETSSVIKEESFQEIRSQEKQLDEMLEILSQKSMEEKQNSRKGTSKFFRIWYGLRKRELAKTAIGAFAAAFSGISKPVFGFYIITIGVAYFGHDAKRKVALYSIIFAAIGLLSLFSHTLQHYFFGIIGEKAMGNIRRALYSGVLRNEVGWFDKPENSVGSLTSRIISDTAMVKVIIADRMSVIVQCISSVLIATVVSMVVNWRMGLVSWAVMPCHFIGGLVQAKSAKGFSGDNSAAHSELVALTSESTTNIRTVASFCHEEHVLRKAKASLDIPKKKYRNESIKYGIIQGFSIFLWNVAHAVALWYTAILVERRQASFENGIRSYQIFSLTVPSITELYTLIPTVISAISILTPAFQTLDRQTEIEPDVPEDIEPKAIQGNIEFKGVKFNYPLRPEVTVLDNFSLKIKAGSKVAFVGPSGAGKSSVLALLLRFYDPREGQVLIDGKDIKDYNLRWLRKQIGLVQQEPMLFNCSIRENICYGNNEASESEIVEVSREANIHEFVSNLPNGYNTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTVISAMKAISQKGGSGLNSRTTQITIAHRLSTVINSDTIIVMEKGKIVEMGSHSNLIEAETGLYSRLFRLQSFEES 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1483 1260 Pfam ABC transporter transmembrane region 53 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g1483 1260 Pfam ABC transporter transmembrane region 691 953 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g1483 1260 CDD ABC_MTABC3_MDL1_MDL2 1009 1255 - -
Mibi08g1483 1260 Pfam ABC transporter 395 543 IPR003439 GO:0005524
Mibi08g1483 1260 Gene3D ABC transporter type 1, transmembrane domain 39 970 IPR036640 GO:0005524|GO:0016020
Mibi08g1483 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1002 1255 IPR027417 -
Mibi08g1483 1260 SUPERFAMILY ABC transporter transmembrane region 40 346 IPR036640 GO:0005524|GO:0016020
Mibi08g1483 1260 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524|GO:0016887
Mibi08g1483 1260 MobiDBLite consensus disorder prediction 1 25 - -
Mibi08g1483 1260 FunFam ABC transporter B family member 4 366 620 - -
Mibi08g1483 1260 Coils Coil 635 655 - -
Mibi08g1483 1260 CDD ABC_6TM_Pgp_ABCB1_D2_like 681 992 - -
Mibi08g1483 1260 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 53 342 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g1483 1260 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1009 1253 IPR003439 GO:0005524
Mibi08g1483 1260 PANTHER ABC TRANSPORTER B FAMILY 17 612 - -
Mibi08g1483 1260 SMART AAA_5 1036 1230 IPR003593 -
Mibi08g1483 1260 SMART AAA_5 403 588 IPR003593 -
Mibi08g1483 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 613 IPR027417 -
Mibi08g1483 1260 MobiDBLite consensus disorder prediction 617 637 - -
Mibi08g1483 1260 CDD ABC_6TM_Pgp_ABCB1_D1_like 52 350 - -
Mibi08g1483 1260 Pfam ABC transporter 1027 1176 IPR003439 GO:0005524
Mibi08g1483 1260 Gene3D - 999 1259 IPR027417 -
Mibi08g1483 1260 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 690 974 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi08g1483 1260 Coils Coil 11 31 - -
Mibi08g1483 1260 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 612 IPR003439 GO:0005524
Mibi08g1483 1260 CDD ABC_MTABC3_MDL1_MDL2 376 613 - -
Mibi08g1483 1260 FunFam ABC transporter B family member 4 999 1260 - -
Mibi08g1483 1260 Gene3D - 366 614 IPR027417 -
Mibi08g1483 1260 SUPERFAMILY ABC transporter transmembrane region 674 994 IPR036640 GO:0005524|GO:0016020
Mibi08g1483 1260 ProSitePatterns ABC transporters family signature. 1148 1162 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1483 Mibi-ChrMibi08 31157756 31166535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1483 29 1260 Calmodulin-binding Proteins AT2G36910 40.538 0.0 931