Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1448 ATGGAACGAATTCCCATGTGGGTGATCCTCATCCTTTCATGTATTTTCCTCGTTAACTTGACGCATTGTGTGGAACAGGAGGTCAAGAGTTCAATGATAAGCTTCCTTGGTGAACTCTCTAGCCAACAGAATTTTTCTTCTTTGAATTGGAAGGCAGACTCTGATCCTTGTAAGGACCTCTGGTTTGGGATAGCCTGCGATTCTCGTAATGTATCAGTAAGAAGGATATTTCTTGAGAGTATGAATTTATCTGGAACTTTTGATGCTGCTATTCTATGCAATAGTCAACCTCTGGCTGATTCCTTAATGATTCTGAATCTTAATGGAAACAACGTTAATGGAGGGATAGCAGATGAGATTGGAAACTGCAAACAGCTAACTCGCTTGAATTTAGGAGGGAATCAACTTTCTGGGGAACTTCCTCCTTCGCTTGCTATGTTAAATAATTTGAAAAGGCTTGACATTTCGAACAATAAGTTTTCTGGTAACTTGCCAGGCTTGTCCAGAATCTCAGGGCTAAATGTGTTTCTGGCGCAAAACAATAACCTCAGTGGGGTCATACCTGGGTTTGATTTCTCCAACCTTTATAAATTCAATGTTTCATTTAACAATTTTAGTGGCAGAATTCCATATGTGCATGGTCGTTTTTCTGAAGATAGCTTCTTGGGTAATCCTGAACTGTGTGGACTACCATTGCAGAAGAATTGTCCTGTTCATACCACTCTAGATCAAAAATCAGAAGAATCAAATGGTTCAAATGAATTAAATGGATCAAGTGGATCATCAAAGGGTCCTTCTAAAGATCAAATTTTGATGTATTCAGGATATGCTGCTTTGGGTTTGGTAATTGTCCTTTTCGTACTCTATAAACTATGTACAAGGAAGAAAACACAAAAGGCTGGAATATCAAGTAGTAAGGTAGCATCAAGTAGTGATCATGATGTGTTGGACAAACCTACCACTAAAGGTTCTTCAAGTGGACAAAAATCAGTAATGAGCAGATCCGAGATTTCAGTCAACTCTGAAAGTGGTATAGTTTCACAATCACTTGTAGTCCTTAAACAACCAGTGGTAAGTGAAATGAGACTTGAAGACCTGTTGAAAGCCCCTGCAGAAATGCTTGGTAGAGGCAAATATGGTAGTCTTTATAAGGTGAAGTTGGACAACGGGAAGACAGTGGTTGTGAAGAGGATCAAGGACTTGGCTACTTCCAGCCATGACTTCAGGCAAAAAATGGAAACTTTAGGCCAAGTGAAGCACCCTTATGTGCTCTCACCACTTGCTTTCTATTGTTCCAATCAAGAGAAGCTTCTGGTCTACGAATTCCAGGAAAACGGGAGCTTATTCAAGCTTCTTCATGGCGAGTCAAAAGGTTTTGATTGGAGCAGCAGGCTAGGAATTGCAGCTGCAATAGCAGATGGATTAGCTTTCATGCATCAAGAGGTTGGGGAGAAAGGCATTGCACATGGAAACTTGAAATCCTCCAACATTTTGCTGAGCTATCACATGGAGGCGCGCATAAGCGAGTATGGTGTGATGATGAACACGGACGATGAACTGAGCTCATCTTCCGCAAGTCCTCATCGTCCTTATGCTTTTGGGCCACCAAATGCTTTGAAGGCAGATGTGTATGGTTTTGGGGTGATTCTTCTTGAGCTACTCACAGGGAAGTTGGTGAAGAACGATGGGATTGATTTGGCAGAGTGGGTTCAATCTGTTGTGAGGGAAGAATGGACAGGTGAGGTGTTTGACAAGGAACTAATATCAGAGTATGCGAGTGAAGAGAGGTTGGTGAATCTGCTTCGAGTGGCTATCAAATGTGTTCATCGTTCCCCAGAAGCTAGGCCAAGTATGAATCAGGTGGCTCTCATGCTTAACACTATCAAAGAGGAAGAAGAGAGATCTTTGATATATGAAGTTTGA 1923 0.4145 MERIPMWVILILSCIFLVNLTHCVEQEVKSSMISFLGELSSQQNFSSLNWKADSDPCKDLWFGIACDSRNVSVRRIFLESMNLSGTFDAAILCNSQPLADSLMILNLNGNNVNGGIADEIGNCKQLTRLNLGGNQLSGELPPSLAMLNNLKRLDISNNKFSGNLPGLSRISGLNVFLAQNNNLSGVIPGFDFSNLYKFNVSFNNFSGRIPYVHGRFSEDSFLGNPELCGLPLQKNCPVHTTLDQKSEESNGSNELNGSSGSSKGPSKDQILMYSGYAALGLVIVLFVLYKLCTRKKTQKAGISSSKVASSSDHDVLDKPTTKGSSSGQKSVMSRSEISVNSESGIVSQSLVVLKQPVVSEMRLEDLLKAPAEMLGRGKYGSLYKVKLDNGKTVVVKRIKDLATSSHDFRQKMETLGQVKHPYVLSPLAFYCSNQEKLLVYEFQENGSLFKLLHGESKGFDWSSRLGIAAAIADGLAFMHQEVGEKGIAHGNLKSSNILLSYHMEARISEYGVMMNTDDELSSSSASPHRPYAFGPPNALKADVYGFGVILLELLTGKLVKNDGIDLAEWVQSVVREEWTGEVFDKELISEYASEERLVNLLRVAIKCVHRSPEARPSMNQVALMLNTIKEEEERSLIYEV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1448 640 PANTHER OS05G0588300 PROTEIN 8 630 - -
Mibi08g1448 640 SUPERFAMILY Protein kinase-like (PK-like) 372 625 IPR011009 -
Mibi08g1448 640 Gene3D Transferase(Phosphotransferase) domain 1 444 638 - -
Mibi08g1448 640 ProSiteProfiles Protein kinase domain profile. 368 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1448 640 Pfam Protein tyrosine and serine/threonine kinase 372 622 IPR001245 GO:0004672|GO:0006468
Mibi08g1448 640 Gene3D Ribonuclease Inhibitor 192 236 IPR032675 -
Mibi08g1448 640 Gene3D Ribonuclease Inhibitor 26 191 IPR032675 -
Mibi08g1448 640 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 97 187 - -
Mibi08g1448 640 Gene3D Phosphorylase Kinase; domain 1 334 442 - -
Mibi08g1448 640 MobiDBLite consensus disorder prediction 320 334 - -
Mibi08g1448 640 MobiDBLite consensus disorder prediction 242 265 - -
Mibi08g1448 640 SUPERFAMILY L domain-like 34 232 - -
Mibi08g1448 640 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Mibi08g1448 640 MobiDBLite consensus disorder prediction 302 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1448 Mibi-ChrMibi08 30693874 30696054 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1448 10 629 Receptor kinase-like Gene Family AT3G08680 34.161 5.54e-97 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi08g1448 PK_Tyr_Ser-Thr 3.6e-27 CL0016