Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1445 ATGAATCGTGCACGACCAGCAAGAATTTATGATGTTGGGATGAAAAAGAAAGGTGTTGATGAGTTCCCTTTCTACGTTCATCTTGTCAGCTGGGAGAAGGAAAATGTTTCAAGTGAGGCACTAGAAGCTGCTAGGATTGCATGTAACAAATATATGGCTAAATTCGCCGAAAAGGATGCATTCCTCCTGAGAGTTAGGGTGCATCCGTTCCATGTTCTTAGGATTAACAAGATGCTTTCCTGTGCTGGAGCTAATAGGCTCCAAACTGGAATGAGAGGTGCATTCGGAAAGCCCCAAGGAACATGCGCTAGAGTGGCCATTGGACAGGTCCTCCTCTCTGTTCGCTGCAAGGACCCCAATGGCGTTCATGCTCAGGAAGCCCTCCGTCGCGCCAAGTTCAAGTTTCCTGGCCGCCAAAAGATCATTGTTAGCAGAAAATGGGGCTTCACCAAGTTTAACCGCAATGACTATCTGAGGTTCAAGTCTGAGAACAGGATCATGCCTGATGGTGTAAATGCCAAGCTCCTTGGATGCCATGGACCTTTGGCTAACCATTAG 558 0.4731 MNRARPARIYDVGMKKKGVDEFPFYVHLVSWEKENVSSEALEAARIACNKYMAKFAEKDAFLLRVRVHPFHVLRINKMLSCAGANRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDPNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRNDYLRFKSENRIMPDGVNAKLLGCHGPLANH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1445 185 Gene3D Ribosomal protein L10e/L16 9 154 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mibi08g1445 185 PANTHER 60S RIBOSOMAL PROTEIN L10 7 184 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi08g1445 185 CDD Ribosomal_L16_L10e 17 142 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mibi08g1445 185 Pfam Ribosomal protein L16p/L10e 8 142 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mibi08g1445 185 PIRSF RPL10a_RPL10e 4 158 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mibi08g1445 185 FunFam 60S ribosomal protein L10, putative 151 185 - -
Mibi08g1445 185 FunFam 60S ribosomal protein L10 2 182 - -
Mibi08g1445 185 Gene3D - 155 185 - -
Mibi08g1445 185 SUPERFAMILY Ribosomal protein L16p/L10e 8 149 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1445 Mibi-ChrMibi08 30664697 30666056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1445 8 184 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 85.876 2.35e-110 312