Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1443 ATGGAGAAATTGAACTTGCCCCTATTGATACATCTGAAACAAGTCTCTTCTTCAGTATTCACCTTCAACTCCTACCTTATGGGAACAGCTAAGGCAAGAACTTGGAGCTGCCATTACCTAGCACACATGATGTTCAAGTCCTTAATTTATGCAATTGTTTCACTTAGCTTCTTACTATTCTTCTCTGGAACTACTGTAGCAGATCTGAACTCTGATAGACAGGCTCTTTTAGAGTTTGCTTCCAGTGTCCCACATGCCAGAAGACTGAACTGGAATGATTCTTCATCAATTTGCACCTCATGGGTGGGTGTGACTTGCAACTCAGATAAAACTCGGGTCATTGCCATTCATCTTCCAGGAATTGGCCTCAAAGGTCACATTCCAGAAAACTGCATAGGAAAACTAGGTGCCCTTACAGTACTGAGCCTTCACACTAATGGCCTTAATGGGAAGCTTCCTTCAGATATCCTTTCCATTCCTTCACTTGAGTATGTACACATTCAGCAGAATAACTTGTCAGGTCCAATCCCTTCATCTATCTCTCCTAAACTTATTGCATTTGATATTTCTTTCAACTCCTTCTCTGGCACTATCCCACCTACATTTGTCAATCTCAGAAGACTCACCTGGTTGTATTTTCAAAACAATTCCATCTCTGGACATATCCCTGACTTCAATCTCCCAAATATCAAATTTCTTAACTTGAGTTATAATAACTTGAACGGCTCAATTCCAAACTCCATCCGAAAATTCCCTCACAGTTCTTTCCTTGGGAACTCTCTTTTGTGTGGGCCACCTCTGAATCATAATTGTTCTGGAATCACCCCTTCTGGATCTCCTCCATCTGCTAATACCTCGGTGACTCCAGCAAGTACCCAAAGTCAAGAATCAACCAAACCAAAGAAAAAATTTGGATTGCCTTTTATACTTGCTCTGGTAATTGGGGGATGTGCATTCCTAGCTCTCCTAGTTTTGGTAATCTCATTGTGCTGTTGCAAGAAGAAAAAGGGACCAAATGGTGGCATACTGAAAGCAAAGGCAGCTTGTGGAGGAAAGAATGAGATATCAAAGAGTTTTGGAAGTGGAGTACAAGGGGCTGAGAAGAACAAGTTGTTTTTCTTCAGAGGTTGCTCTCATACCTTTGATCTTGAGGATTTGCTTAAGGCATCGGCTGAAGTTCTTGGAAAGGGAAGCTATGGAACAGCTTATAAGGCTGTTTTAGAGGAGGGAATAACAGTGGTGGTTAAGAGGTTGAGGGAAGTTGTGGTTGGAAAGAAGGAGTTTGAACAGCAGATGGATATTGTGGGGAGAGTAGGAAGCCACCCAAATGTCATGCCTCTTCAAGCTTATTACTATTCCAAAGATGAGAAACTTCTGGTTTGCAGCTTCATGCCAGGAGGAAGCTTATTTGCCTCATTGCATGGAAACAGGGGAGAGGGAAGAACACCATTAGACTGGGATGCAAGAATGAAGATCACACTAGGAGTTTCCAAAGGAATCGCATTCATACACTCCGAAGGTGGTCCCAAATTCACACACGGCAACATCAAATCCACCAACATCCTCCTAACCCAAGACCTCGATGGCTGCGTCTCCGACATCGGACTACCTCCAATGATGTCCACTCCTGCGACCATGTCAAGATCTAACGGCTACCGTGCGCCTGAAGTAACAGACGCCAGAAAAATCACCCACAAATCCGACGTATACAGCCTCGGTGTACTCCTCCTAGAAATTCTGACAGGAAAATGTCCCATGAGATATCCTGGCCACGACGAGGTTGTTGATCTCCCGAGATGGGTGAGATCAGTGGTACGGGAAGAATGGACGGCGGAAGTTTTTGATGAAGAACTATTGAGAGGTCGATATGTGGAAGAAGAAATGGTTCAGATGCTTCAGATTGCATTGGCTTGTGTAGTGAAGGTGCCGGATTCGAGGCCGAGGATGGAAGAAGTTGTGAGGATGATGGAGGAAATTCGGCAGCCAGAGTTGAGGAACCGGCCATCTTCTGAGTCTGAGTCGAATTTGCAGACACCTTGA 2040 0.4422 MEKLNLPLLIHLKQVSSSVFTFNSYLMGTAKARTWSCHYLAHMMFKSLIYAIVSLSFLLFFSGTTVADLNSDRQALLEFASSVPHARRLNWNDSSSICTSWVGVTCNSDKTRVIAIHLPGIGLKGHIPENCIGKLGALTVLSLHTNGLNGKLPSDILSIPSLEYVHIQQNNLSGPIPSSISPKLIAFDISFNSFSGTIPPTFVNLRRLTWLYFQNNSISGHIPDFNLPNIKFLNLSYNNLNGSIPNSIRKFPHSSFLGNSLLCGPPLNHNCSGITPSGSPPSANTSVTPASTQSQESTKPKKKFGLPFILALVIGGCAFLALLVLVISLCCCKKKKGPNGGILKAKAACGGKNEISKSFGSGVQGAEKNKLFFFRGCSHTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGITVVVKRLREVVVGKKEFEQQMDIVGRVGSHPNVMPLQAYYYSKDEKLLVCSFMPGGSLFASLHGNRGEGRTPLDWDARMKITLGVSKGIAFIHSEGGPKFTHGNIKSTNILLTQDLDGCVSDIGLPPMMSTPATMSRSNGYRAPEVTDARKITHKSDVYSLGVLLLEILTGKCPMRYPGHDEVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVVKVPDSRPRMEEVVRMMEEIRQPELRNRPSSESESNLQTP 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1443 679 Gene3D Transferase(Phosphotransferase) domain 1 464 677 - -
Mibi08g1443 679 Gene3D Ribonuclease Inhibitor 183 273 IPR032675 -
Mibi08g1443 679 ProSiteProfiles Protein kinase domain profile. 388 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1443 679 Gene3D Ribonuclease Inhibitor 70 182 IPR032675 -
Mibi08g1443 679 PANTHER OS05G0588300 PROTEIN 49 670 - -
Mibi08g1443 679 SUPERFAMILY Protein kinase-like (PK-like) 392 657 IPR011009 -
Mibi08g1443 679 Pfam Protein kinase domain 392 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1443 679 SUPERFAMILY L domain-like 81 267 - -
Mibi08g1443 679 MobiDBLite consensus disorder prediction 660 679 - -
Mibi08g1443 679 Pfam Leucine rich repeat N-terminal domain 70 107 IPR013210 -
Mibi08g1443 679 FunFam pollen receptor-like kinase 1 356 463 - -
Mibi08g1443 679 MobiDBLite consensus disorder prediction 274 299 - -
Mibi08g1443 679 ProSitePatterns Protein kinases ATP-binding region signature. 394 425 IPR017441 GO:0005524
Mibi08g1443 679 Gene3D Phosphorylase Kinase; domain 1 355 463 - -
Mibi08g1443 679 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 464 670 - -
Mibi08g1443 679 FunFam Leucine-rich repeat receptor-like protein kinase 71 181 - -
Mibi08g1443 679 FunFam Leucine-rich repeat receptor-like protein kinase 182 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1443 Mibi-ChrMibi08 30652314 30655594 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1443 55 674 Receptor kinase-like Gene Family AT5G58300 57.692 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi08g1443 Pkinase 1.3e-32 CL0016