Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1436 ATGCTTCGAAGTTGGAGGAGGATATCGCCATTTTCATTGTCCCCTCTGAGAATGTTGTCATCGTCGTCTCCATCGTCTTCTGCTGCTTGTGAAAGTATACGACCCTCCTTTCTCAGAAATCCTTCTTCAAATCCCAGAATCTCACTTCCTCATCTTCCTCCTCTTTCTTCAAATTCTCATATTAGCCCTCAAAGAATGAGGCTTTCGACCAGCTGTTTTGGGGCCAGTAGCCCCATCCCCATATCTGGAAAACCCGATTCGGAAAATGAAGAAACCCAATCCGATGATTCTCAGTCGCTTGTGGTGGTGTCGTTCTATAAGTTCGCGGATTTCCCTGACCACGCCAACTTGCGGAAACCCTTGAAGGCACTCTGTGAAGAACTGCGCATTTCAGGGGGTATAATTCTTGCGCCTGAAGGAATCAATGGCAGCATATGTGGCACTCGCGAGTCAGTGGAGAAAGTTCTTGCATTTATACAAAGTGATAACCGTCTTCAGGGTCTGAGACAAGTGGAATCACCTGTGAGTCCTGAGGAAGAAGCTATTCATCATGGACATAGTGCCAGTTCTCCTCTTGCTGCAGGGGAAGATGCACCTTTCCGATGGGATCATGTGAGGGTGAAGTTGAAGAAAGAGATTGTCACGCTTGGGATGCCTGCTGTATCACCTACTGAAAGGGTTGGAAAGTATGTGAGCCCGAGAGATTGGAATGCATTGATCAGTGATCCAGATACAGTTGTGATTGATGTGCGGAACGATTACGAAACAAGAATAGGAAAATTTAAAGGAGCCGTTGATCCATGTACAACATCATTTCGTGAATTTCCTTCTTGGGTGGAGGATCATTTTGAGCTTACCGGAAACAGTGGCAAGCCTGAAATAGTTGAGGCAAACAATTCAGGTGGAAGTGTAGAAAAGGAAGTACAAAATCCTGAACATATGCCACGTGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAAAAAGCTACAAGTTTGCTCCTCAGTAAAGGTTTCAAAGAGGTCTATCACTTGGAAGGTGGGATTCTGAAATATCTGGAGGAAGTGCCGAAAACAGAAAGCCTATGGCAGGGTGAGTGCTTTGTGTTTGACAAGCGAGTTTCTGTGGACCATGGTTTGGTGCAAGGAAATTTCAAGCTATGCTATGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAAGCTCCGGAATTTGAATATGGAGTTTCTTGCCCATACTGTTTTTCACAGAAATCAGAGGAAGAGAAGGAGAGGGCTCGAGCTCGGCAAAGACAGTTTGAGAGATGGGGAATCATAGGTGGTCCGGACAAAGGTCGTCGTCCAACATTTAAGCCGGATAGTGGCAGTAGCAAATCTGGCCAGCTTTCACGTTCAATTTAA 1401 0.4568 MLRSWRRISPFSLSPLRMLSSSSPSSSAACESIRPSFLRNPSSNPRISLPHLPPLSSNSHISPQRMRLSTSCFGASSPIPISGKPDSENEETQSDDSQSLVVVSFYKFADFPDHANLRKPLKALCEELRISGGIILAPEGINGSICGTRESVEKVLAFIQSDNRLQGLRQVESPVSPEEEAIHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPAVSPTERVGKYVSPRDWNALISDPDTVVIDVRNDYETRIGKFKGAVDPCTTSFREFPSWVEDHFELTGNSGKPEIVEANNSGGSVEKEVQNPEHMPRVAMYCTGGIRCEKATSLLLSKGFKEVYHLEGGILKYLEEVPKTESLWQGECFVFDKRVSVDHGLVQGNFKLCYGCKQPVSDADMEAPEFEYGVSCPYCFSQKSEEEKERARARQRQFERWGIIGGPDKGRRPTFKPDSGSSKSGQLSRSI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1436 466 ProSiteProfiles Rhodanese domain profile. 241 361 IPR001763 -
Mibi08g1436 466 Hamap tRNA uridine(34) hydroxylase [trhO]. 98 398 IPR020936 -
Mibi08g1436 466 Pfam Rhodanese-like domain 236 354 IPR001763 -
Mibi08g1436 466 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 210 387 IPR036873 -
Mibi08g1436 466 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 89 430 IPR020936 -
Mibi08g1436 466 MobiDBLite consensus disorder prediction 17 62 - -
Mibi08g1436 466 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Mibi08g1436 466 MobiDBLite consensus disorder prediction 452 466 - -
Mibi08g1436 466 Gene3D - 215 396 IPR036873 -
Mibi08g1436 466 Pfam UPF0176 acylphosphatase like domain 101 213 IPR040503 -
Mibi08g1436 466 MobiDBLite consensus disorder prediction 173 193 - -
Mibi08g1436 466 CDD RHOD_YceA 228 354 - -
Mibi08g1436 466 MobiDBLite consensus disorder prediction 425 466 - -
Mibi08g1436 466 Gene3D - 87 214 - -
Mibi08g1436 466 SMART rhod_4 231 358 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1436 Mibi-ChrMibi08 30584547 30588003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1436 87 466 Sulfurtransferasese or Rhodanese AT2G40760 76.042 0.0 605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1436 08 30584547 30588003 Mibi08g1436 08 30584547 30588003 ECH