Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1431 ATGAATGCAAAGACTGCGGATAGTGATTCTGAAATCTCGCCTGTCAGAGAAGAAATAAGCGTTTTGTTTTTATTCTTGGTCCTCCCGCAATTAATTCTCTCTTCTAGCCCCCCATCCTTTATTTTAACCGCGTTTATTACCTTCTGCATCAGACCCATCACTCCCCCTCCTCCTTTATTATCTGTCTTTCAAAGATTCAAAATTAAACGCATGGCTTCTTCCTCTTCCTCTTCCTCACCAAACTGGGTCATGGAACATGGAGTTATGCCCCATGTTTTGGCTGTTGATGACAACCTCATTGACCGCAAACTCGTTGAGAAGCTCCTCAAGAACTCATCTTGCAAAGTGACAACTGCAGAAAATGGACCGAGGGCATTGGAGTTTCTGGGGTTGGCAAGTGATGAAGAAGACACTTTGGAGGGCACTGGATCCAAAGTGAATATGATTATCACAGACTATTGTATGCCTGGGATGACAGGATATGAGTTACTCAAGAAAATAAAGAAATCATCAGTCATGAAGGAGGTTCCAGTGGTGATCATGTCATCTGAGAACATCCCAACTAGGGTGAACAAGTGTTTGGAGGAAGGTGCTCAGATGTTCATCCAAAAGCCCCTCAAACAATCTGATGTACAGAAGCTGACATGTCAACTGATGAATTGCAGAGGCTAG 672 0.4345 MNAKTADSDSEISPVREEISVLFLFLVLPQLILSSSPPSFILTAFITFCIRPITPPPPLLSVFQRFKIKRMASSSSSSSPNWVMEHGVMPHVLAVDDNLIDRKLVEKLLKNSSCKVTTAENGPRALEFLGLASDEEDTLEGTGSKVNMIITDYCMPGMTGYELLKKIKKSSVMKEVPVVIMSSENIPTRVNKCLEEGAQMFIQKPLKQSDVQKLTCQLMNCRG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1431 223 SMART REC_2 90 215 IPR001789 GO:0000160
Mibi08g1431 223 SUPERFAMILY CheY-like 89 219 IPR011006 -
Mibi08g1431 223 ProSiteProfiles Response regulatory domain profile. 91 219 IPR001789 GO:0000160
Mibi08g1431 223 FunFam Two-component response regulator ORR5 90 221 - -
Mibi08g1431 223 Gene3D - 88 221 - -
Mibi08g1431 223 CDD REC_typeA_ARR 92 214 - -
Mibi08g1431 223 Pfam Response regulator receiver domain 92 213 IPR001789 GO:0000160
Mibi08g1431 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR 90 218 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1431 Mibi-ChrMibi08 30484555 30485916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1431 91 222 Response Regulator Gene Family AT3G56380 74.627 8.68e-66 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi08g1431 Response_reg 1.3e-21 CL0304