Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1429 ATGCGAGCCGTTTTGAATATGAAAGTTCTTTCCTTTTTGTTCTTGCTGCTTATCATAGATCCGGGGTTGGTGGTTTCTGTGAACCCGTCCCTTAATGACGACGTTCTGGGTCTAATAGTATTCAAAGCTGACATAAAAGATCCGAAGGGTAAACTAGTAAACTGGAATGAAGATGATGAGAGTTGCTGTGGTTGGGTTGGTGTGAAATGCAACCCTAGATCCAACAGAGTTGTAGAGCTCAACCTTGATGGGTTCTCTCTTTCGGGTCATGTAGGTAGAGGCCTCTTTCAGTTGCAGTTTCTGCGCAAACTTTCTCTGGCGAAGAACAATCTCACTGGTGGCATAAGCTCCAACATTGCCAGGCTTGACAACCTTCGAGTGATTGATTTGAGCGATAATAGTCTCTCTGGTGAGCTTCCAGATGACCTTTTCCGACAATGTGGGTCTCTAAGGGCGATTTCTTTGGCGAGAAATAGGTTTACAGGGAAGATTCCCGCTAGCTTGAGCTCATGTTCGGCTCTTGCTTCAATTGATCTCTCGTTCAACCAGTTTTCGGGTACTATTCCTGCTGGTATATGGAATTTGAGTGGACTAAGGTCACTGACTTTGTCGGATAATTTGTTGGAAGGTGAGATTGTAAAGAGTGCTGAAGGATTGAAGAATTTGAGGGCAATAAACTTGGCTAGGAATCAGTTGTCTGGGAAGATCCCTGATGGGTTTGGAAGTTGCTTGCTTTTGAGGTCTATTGATCTTAGTGATAATTCTCTTTCTGGTGGCTTTCCGGGTGATATGAAGGAGCTCGCATTGTGTAGTTATCTTAGTGTTAGTGGAAATGCTTTTTCAGGTGAGATTCCTGAATGGATTGGGGAAATGAAAAGCCTGGAGACTTTGGATGTTTCTCTGAACAGATTTTCAGGTAAGGTGCCAAGCTCCATAGGAAATCTTCAGTCATTGAAGACTATGAATTTTTCTGGAAATGGTTTTTCTGGTAACCTGCCAGAGTCTATGATAAATTGCACAAGCCTTTTAGCCTTGGATGTTAGTCAGAATTCAATGTCAGGTGATCTTCCCTCGTGGATTTTTAAGTCAGATTTGCAGAAAGTCTTGGTATCAGAAGATAAATTGCGTGGAGGTCTGAAAAGTTCTCTATATACCTTAGAGGCAGTTGCTGTTCAAAGTCTTCAAGTGCTGGATTTATCTGACAATGCATTTTCTGGCGAAATTACATCTGATATCTCAGTCTTAAGCAGCTTGAAGCTCTTGAATTTATCAAAGAACACCCTGAGTGGTCCTATACCAGCTGCCATTGGAGAATTGAAGTCCCTGAATAGTCTTGACTTGAGTGAGAACCGGCTAAATGGAAGCATACCTATGGAAATAGGAGGAGCTGTATCTTTGAAAGAACTGAGATTGAGGAAAAACTATCTTGTGGGAGCCATTCCAACCTCAATTGGTAACTGCACATCATTGTCGACTTTAATTCTATCACAGAACAGCTTCATCGGTTCAATACCTGCAGTAATGGCAAAGCTGACTAATTTACAAGCTGTAGACTTGTCTTTGAACAATCTGACTGGAAACCTTCCCAAGCAATTGGCGAATCTGCCCAACCTTCTTTCCTTCAACATATCTCATAACAACCTAAAGGGTGAACTACCAGCTGGCCCCTTTTTCAATACTATTTCACCGTCCTATCTTACCGGCAATCCATCTCTTTGTGGTGCTGCTGTCAAGAAATCATGCCCTTCTGTCCTTCCCAAGCCTATTGTCCTAAATCCAAACACCACTTCCGATTATGCTCCAGGGACACTACCTCCCAATGTTGGTCACAAAAGAATCATTCTCAGCATTTCTGCACTCATTGCCATTGGTGCAGCTGCTGTCATTGTAATTGGTGTCATTGCCATCACTGTTCTAAATCTCCGTGTTCGGTCCTCTACATCGCATGCTCCGGCTGCCCTCACATTTTCTGCGGGGGATGAATTTAGCCGTTCCCCAACTACTGATGCCAATTCTGGCAAGCTTGTCATGTTTTCAGGTGAGCCAGACTTTAGCACCGGGGCACATGCTTTGCTTAATAAGGATTGCGAACTTGGGCGTGGCGGGTTTGGAGCAGTGTACCAAACAGTTCTTAGAGATGGTCATGCAGTTGCAATCAAGAAGCTCACTGTGTCAAGTCTCGTGAAGTCTCAGGATGATTTTGAAAGAGAAGTGAAGAAACTAGGAAAAGTCAGACACCAAAATCTTGTAGCACTTGAAGGTTACTATTGGACACCGTCCCTACAACTCCTCATATATGAGTTTGTTTCTGGTGGCAATCTTTATAAGCATCTCCATGATGGATCAGGTGGAAATTTCCTCTCGTGGAATGAGAGGTTTAATATAATTCTTGGTACAGCAAAAGCCTTGGCTCATTTGCATCACATGAACATTATCCACTACAACATCAAGTCTACTAATGTGCTAATTGATGGCTATGGGGAAGCTAAAGTGGGTGACTTTGGCCTTGCAAGATTATTACCAATGCTTGACCGTTATGTTTTGAGCAGCAAAATTCAAAGTGCTCTTGGCTACATGGCACCAGAATTTGCCTGCCGTACTGTGAAGATAACAGAGAAATGCGATGTATATGGGTTTGGAGTATTGGTCTTGGAAGTGGTCACAGGGAAGAGGCCAGTTGAATACATGGAGGACGATGTGGTTGTGCTTTGTGACATGGTCAGAGGAGCTCTGGAAGAAGGAAGAGTGGAAGAATGTATTGACGGGAGGCTGCAGGGGAAATTCCCGGCCGAGGAAGCCATTCCTGTGATGAAACTAGGCTTAATATGCACTTCACAAGTGCCCTCAAACCGACCAGATATGGGAGAGGTAGTCAATATATTGGAGCTAATTAGATGTCCCTCAGAAGGACAAGAGGAGCTCGGATGA 2928 0.4365 MRAVLNMKVLSFLFLLLIIDPGLVVSVNPSLNDDVLGLIVFKADIKDPKGKLVNWNEDDESCCGWVGVKCNPRSNRVVELNLDGFSLSGHVGRGLFQLQFLRKLSLAKNNLTGGISSNIARLDNLRVIDLSDNSLSGELPDDLFRQCGSLRAISLARNRFTGKIPASLSSCSALASIDLSFNQFSGTIPAGIWNLSGLRSLTLSDNLLEGEIVKSAEGLKNLRAINLARNQLSGKIPDGFGSCLLLRSIDLSDNSLSGGFPGDMKELALCSYLSVSGNAFSGEIPEWIGEMKSLETLDVSLNRFSGKVPSSIGNLQSLKTMNFSGNGFSGNLPESMINCTSLLALDVSQNSMSGDLPSWIFKSDLQKVLVSEDKLRGGLKSSLYTLEAVAVQSLQVLDLSDNAFSGEITSDISVLSSLKLLNLSKNTLSGPIPAAIGELKSLNSLDLSENRLNGSIPMEIGGAVSLKELRLRKNYLVGAIPTSIGNCTSLSTLILSQNSFIGSIPAVMAKLTNLQAVDLSLNNLTGNLPKQLANLPNLLSFNISHNNLKGELPAGPFFNTISPSYLTGNPSLCGAAVKKSCPSVLPKPIVLNPNTTSDYAPGTLPPNVGHKRIILSISALIAIGAAAVIVIGVIAITVLNLRVRSSTSHAPAALTFSAGDEFSRSPTTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYQTVLRDGHAVAIKKLTVSSLVKSQDDFEREVKKLGKVRHQNLVALEGYYWTPSLQLLIYEFVSGGNLYKHLHDGSGGNFLSWNERFNIILGTAKALAHLHHMNIIHYNIKSTNVLIDGYGEAKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1429 975 Pfam Protein tyrosine and serine/threonine kinase 694 960 IPR001245 GO:0004672|GO:0006468
Mibi08g1429 975 Gene3D Ribonuclease Inhibitor 307 585 IPR032675 -
Mibi08g1429 975 CDD STKc_IRAK 698 964 - -
Mibi08g1429 975 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mibi08g1429 975 Gene3D Ribonuclease Inhibitor 32 306 IPR032675 -
Mibi08g1429 975 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 219 962 - -
Mibi08g1429 975 SUPERFAMILY L domain-like 47 372 - -
Mibi08g1429 975 Gene3D Transferase(Phosphotransferase) domain 1 769 973 - -
Mibi08g1429 975 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 32 310 - -
Mibi08g1429 975 Pfam Leucine rich repeat 393 452 IPR001611 GO:0005515
Mibi08g1429 975 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Mibi08g1429 975 Pfam Leucine rich repeat 465 524 IPR001611 GO:0005515
Mibi08g1429 975 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Mibi08g1429 975 SUPERFAMILY RNI-like 271 572 - -
Mibi08g1429 975 Gene3D Phosphorylase Kinase; domain 1 685 768 - -
Mibi08g1429 975 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 311 585 - -
Mibi08g1429 975 PRINTS Leucine-rich repeat signature 439 452 - -
Mibi08g1429 975 PRINTS Leucine-rich repeat signature 125 138 - -
Mibi08g1429 975 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 769 970 - -
Mibi08g1429 975 SUPERFAMILY Protein kinase-like (PK-like) 696 959 IPR011009 -
Mibi08g1429 975 SMART LRR_typ_2 291 315 IPR003591 -
Mibi08g1429 975 SMART LRR_typ_2 391 415 IPR003591 -
Mibi08g1429 975 SMART LRR_typ_2 535 559 IPR003591 -
Mibi08g1429 975 SMART LRR_typ_2 122 146 IPR003591 -
Mibi08g1429 975 SMART LRR_typ_2 439 463 IPR003591 -
Mibi08g1429 975 SMART LRR_typ_2 219 243 IPR003591 -
Mibi08g1429 975 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 686 768 - -
Mibi08g1429 975 ProSiteProfiles Protein kinase domain profile. 692 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1429 975 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1429 Mibi-ChrMibi08 30435547 30438993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1429 8 975 Receptor kinase-like Gene Family AT3G56370 68.378 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mibi08g1429 PK_Tyr_Ser-Thr 6.4e-41 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1429 08 30435547 30438993 Mibi08g1429 08 30435547 30438993 ECH