Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1428 ATGTCGTCGGAAGAAATTGGCCTTCCTCCAGATCAGAGAATCGATAACGGTCTCAATTCACCCCTAGTCTTCCAAGACGACACCTTGCGATTCTCCTGTGGTACCCCACAACGTCGGGTCGGAGACCCAGTTTCGAAAACGAGGGATATTGGCGGTTTCATTGATGAAGAAAAGATGTTCGCTGTAGATCGTGACCGTTTCTTCCCTTCTCAGGGATTGCAATTCCGTCGTAATGTTTACGGTGACACTGCAACTCCTAGCGACGATGATACGGATGGCGACGATGATGAAGACGACGACGACGACGACGATGTTGAGGGTGTTAACGATGCTAGAAAAGGGAATTCCAATCCCAATTCGATTAATGATATAAATATTAATAGTATAAGTGGTGGTAACCTGGCTACTTCTGCAGATGGAGTATCGAATGGGAAAGCTAAGCGTCATTCGTCTTATGGATCGGATAGAGAGGTACTGGGGAAGGATGGGGAAGTTGGGCAGACGAAGAATGATTCAAGGGGTAATGATGAAGATCATCATCAGCAAGAAAGGTTAGATAAATCGCGGAGTGCGGTTACGATTGCTGAAACTGATTGTGAGGAGTATTATTCACAATATCTTCAAGGCACGGAGGGCACAACTGTTGCGCAGAAAGCTATGGCGGGGGGAAATGATTGCGGATTTAGCGGAAGGAAGGATGTTATCTATTCAAGTGAGTCAGTTGAATCATTGAGGGCAGTGCTTTCTGATCCCATAACGGGAGCTCTTATGGATGATGCAATGATATTGCCTTGTGGACATTCCTTTGGTGGAGGAGGAATACAGCATGTTATTAGAATGAAAGCTTGTTCCACTTGTTCCCAACCCATATCTGAAGAATCAATATCTCCAAATCTATCTCTTAGAGTTGCTGTGCAGGCATACCGTCGGGAAGAGGAGTCACAGTTTTACCGATCATCCAAAAAAAGAAAAGAAAGATTTGATCAGGGTGGTTATGGTGATTCAACAGTTATGGAACAACCAAGAGGTAGAGGTGTTCAATTTCCATTTGCTGTGATGGACCGGGTGGTTATAAAGGGAAACAAGAGGACACCACAGCGTTTTGTTGGACGGGAAGCTATTGTAACAACACAATGCCTGAATGGATGGTATGTGGTAAAGACACTGGACAATGCAGAGAGTGTAAAGTTGCAGTATCGCTCGCTTGCTAAGGTTTCAGATGACCCTTCAAAACCGGCCTCCAGCAAAGTGACACCTAATTGGCTTTAA 1269 0.45 MSSEEIGLPPDQRIDNGLNSPLVFQDDTLRFSCGTPQRRVGDPVSKTRDIGGFIDEEKMFAVDRDRFFPSQGLQFRRNVYGDTATPSDDDTDGDDDEDDDDDDDVEGVNDARKGNSNPNSINDININSISGGNLATSADGVSNGKAKRHSSYGSDREVLGKDGEVGQTKNDSRGNDEDHHQQERLDKSRSAVTIAETDCEEYYSQYLQGTEGTTVAQKAMAGGNDCGFSGRKDVIYSSESVESLRAVLSDPITGALMDDAMILPCGHSFGGGGIQHVIRMKACSTCSQPISEESISPNLSLRVAVQAYRREEESQFYRSSKKRKERFDQGGYGDSTVMEQPRGRGVQFPFAVMDRVVIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVSDDPSKPASSKVTPNWL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1428 422 SUPERFAMILY RING/U-box 239 314 - -
Mibi08g1428 422 Pfam U-box domain 249 313 IPR003613 GO:0004842|GO:0016567
Mibi08g1428 422 MobiDBLite consensus disorder prediction 149 189 - -
Mibi08g1428 422 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 89 419 - -
Mibi08g1428 422 MobiDBLite consensus disorder prediction 315 338 - -
Mibi08g1428 422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 313 IPR013083 -
Mibi08g1428 422 MobiDBLite consensus disorder prediction 71 124 - -
Mibi08g1428 422 MobiDBLite consensus disorder prediction 1 21 - -
Mibi08g1428 422 MobiDBLite consensus disorder prediction 139 189 - -
Mibi08g1428 422 MobiDBLite consensus disorder prediction 315 330 - -
Mibi08g1428 422 MobiDBLite consensus disorder prediction 87 106 - -
Mibi08g1428 422 ProSiteProfiles U-box domain profile. 243 315 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1428 Mibi-ChrMibi08 30420736 30424414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1428 188 422 Plant U-box Gene Family AT5G05230 58.678 3.78e-91 278