Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1424 ATGGCTCGCCTACTGCTAAGCACAAATTCAACCTCAGATTCATCAGGTAATGGCAACAGAACCGGGGGTTTTAACACTAGTGATGCCAATTTTGACACAAATATGGTGATTATACTGGCAGCCTTGCTGTGTGCACTAATATGTGCTTTGGGGTTAAACTCAATTGTAAGATGTGCTTTGAGATGTAGCAGCAGGTTTGCTTTTGAGACCCCAGATGAAGCTGCAGCTCGTGTAGCAGCAAAAGGGTTGAAGAAGAGTGTATTGCGTCAGATCCCTATTGTTGTATATGGTTCATCAGGTTCTACCGATGTTGGTGCCACTGAGTGTCCAATTTGCCTGGGAGAGTTTGTGGATGGAGAGAAGGTTAGAGTTCTTCCAAAGTGCAACCATGGATTCCATGTGAGGTGCATAGACACATGGCTTCTCTCACATTCTTCTTGCCCTACTTGCAGACAGTCTTTGCTTGAACAACATAGTGCAAGCACTTCTGGTTCTGGGAATGTGTAG 507 0.4497 MARLLLSTNSTSDSSGNGNRTGGFNTSDANFDTNMVIILAALLCALICALGLNSIVRCALRCSSRFAFETPDEAAARVAAKGLKKSVLRQIPIVVYGSSGSTDVGATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPTCRQSLLEQHSASTSGSGNV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1424 168 SUPERFAMILY RING/U-box 108 157 - -
Mibi08g1424 168 Pfam Ring finger domain 108 151 IPR001841 -
Mibi08g1424 168 SMART ring_2 109 150 IPR001841 -
Mibi08g1424 168 FunFam RING-H2 finger protein ATL72-like 74 155 - -
Mibi08g1424 168 MobiDBLite consensus disorder prediction 1 23 - -
Mibi08g1424 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 156 IPR013083 -
Mibi08g1424 168 CDD RING-H2_PA-TM-RING 108 151 - -
Mibi08g1424 168 PANTHER RING-H2 FINGER PROTEIN ATL78 25 165 IPR044602 GO:0016567|GO:0016740
Mibi08g1424 168 SMART FANCL_C_2 105 155 - -
Mibi08g1424 168 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1424 Mibi-ChrMibi08 30367424 30367930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1424 1 165 C3H Transcription Factor Family AT3G10910 58.960 6.20e-64 192