Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi08g1423 | ATGTCGTTTCCCTCCTCCTCCTCTCGCGGCCCATTCCACCGCCGTGCCCAATCGGAGGGCCAATTTCGATTACCCGACAATTTCGATCTAGAACCTTCCCTTTTCGATGGTCCTTCCTTCGCATTTCAAGATCTAGCCGCTTCTGATGAAGACCTTTTAACCGCTTATATGGATCTCGACAAATCTGGATCTCAACTTAACTCTGACCCTAATAATGTTAATGTTGGATCTGTTGAGATTGTTGGCGATGGTGATAATAAGCAGCCTGATAGGCCTCGTCATCGGCATAGCAATTCTGCTGATGGGTCTTCCGTTCTTGAGGCCATTGAGGCTAAGAAGGCCATGGCCCCTGATAAGCTTGCCGAATTGTGGATTGTTGATCCCAAGCGAGCAAAGAGGATTCTGGCGAATCGCCAATCTGCCGCTCGTTCCAAAGAGAGAAAAGCGCGATATGTGATAGAACTTGAGAAGAAAATTCACTCTCTTCAAACAGAAGCAACCACTCTTTCCGCTCAATTAAATCTTTTTCAGAGAGATACAACTGGTTTGACTAGTGAAAATACAGAGCTGAAGCTTCGGTTACAAGCTATGGAGCAACAAGCTAAGTTGCGTGATGCCCTAAATGAAGCTCTGAAGAAAGAGGTTGATAGGCTTAAGGTTGCTACTGGAGAGGCAGTTACTCCAACCTATAATGTGCAAGGGCATCAAATTCCATACTCTGGTTCTTTCTTCTTACATCCGCGACGTGGACCAGTCGGTGAACCTCAGATTATGCAAATGCAGCAGTTACATGCACTGTCATCTAATTTGTCAAATCCTCATCATCAGTCTCTGCTTGCTGTAGCCAGCCCGCGCGACCTGTCAGAAATGTTGCCTCAGGAATCTATTGGCCAGTTTCAGGGGCTTGAGATAAGCACAGGGGGTGCCTCCCTGACGCCTGATGGCTCCTCTGGTTCCGTCAAACGAATCAGCAGTGCCTTTTGA | 984 | 0.4726 | MSFPSSSSRGPFHRRAQSEGQFRLPDNFDLEPSLFDGPSFAFQDLAASDEDLLTAYMDLDKSGSQLNSDPNNVNVGSVEIVGDGDNKQPDRPRHRHSNSADGSSVLEAIEAKKAMAPDKLAELWIVDPKRAKRILANRQSAARSKERKARYVIELEKKIHSLQTEATTLSAQLNLFQRDTTGLTSENTELKLRLQAMEQQAKLRDALNEALKKEVDRLKVATGEAVTPTYNVQGHQIPYSGSFFLHPRRGPVGEPQIMQMQQLHALSSNLSNPHHQSLLAVASPRDLSEMLPQESIGQFQGLEISTGGASLTPDGSSGSVKRISSAF | 327 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1423 | 327 | FunFam | probable transcription factor PosF21 | 128 | 181 | - | - | |
| Mibi08g1423 | 327 | Pfam | bZIP transcription factor | 129 | 187 | IPR004827 | GO:0003700|GO:0006355 | |
| Mibi08g1423 | 327 | Coils | Coil | 194 | 214 | - | - | |
| Mibi08g1423 | 327 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 127 | 190 | IPR004827 | GO:0003700|GO:0006355 | |
| Mibi08g1423 | 327 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Mibi08g1423 | 327 | MobiDBLite | consensus disorder prediction | 84 | 100 | - | - | |
| Mibi08g1423 | 327 | MobiDBLite | consensus disorder prediction | 63 | 102 | - | - | |
| Mibi08g1423 | 327 | CDD | bZIP_plant_RF2 | 130 | 179 | IPR044759 | GO:0003700|GO:0006355 | |
| Mibi08g1423 | 327 | SUPERFAMILY | Leucine zipper domain | 129 | 184 | IPR046347 | GO:0003700|GO:0006355 | |
| Mibi08g1423 | 327 | Coils | Coil | 152 | 172 | - | - | |
| Mibi08g1423 | 327 | Gene3D | - | 128 | 180 | - | - | |
| Mibi08g1423 | 327 | MobiDBLite | consensus disorder prediction | 307 | 327 | - | - | |
| Mibi08g1423 | 327 | SMART | brlzneu | 125 | 189 | IPR004827 | GO:0003700|GO:0006355 | |
| Mibi08g1423 | 327 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 8 | 276 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi08g1423 | Mibi-ChrMibi08 | 30343344 | 30346849 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi08g1423 | 9 | 308 | bZIP Transcription Factor Family | AT2G40620 | 54.848 | 3.96e-95 | 285 |
Transcription factors information