Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1422 ATGGCCATTACAGCAACATTCTCTGCTTTCTCTCTTTTCTTCCTCCTCCTTAACCTTCAAGGCTCCTTTGGTGACGATGGTGGCTGGCAAGGTGGGCATGCCACATTTTATGGTGGGGGTGATGCTTCAGGGACAATGGGAGGAGCTTGTGGGTATGGGAATTTATACAGTCAAGGTTATGGAACTAACACTGCAGCTCTGAGCACTGCTCTGTTTAACAATGGCCTGAGCTGTGGATCTTGCTATGAGATGAGATGCAGTGGAGACCCCAAATGGTGCCTTCCTGGTTCCATCATTGTCACTGCCACTAATTTCTGCCCTCCTAACTTTGCTTTGGCCAATAACAACGGTGGTTGGTGCAACCCTCCTCTCCAACACTTTGATCTTGCTGAGCCTGCTTTCTTGCAGATTGCTCAATACAGAGCTGGGATTGTTCCCATTTCATTCAGAAGAGTCTCCTGTGTAAAGAAAGGAGGGATCAGATTCACCATCAATGGCCACTCATACTTCAACTTGGTTCTGATCACTAACGTTGGAGGAGCTGGTGATATTCATTCTGTGTCAATCAAAGGATCAAGAACAGGGTGGCAAGCCATGTCAAGGAACTGGGGCCAAAACTGGCAGAGCAATTCCTACCTCAATGGCCAGAGCTTGTCCTTCCAAGTCACAACCAGTGATGGCAGAACCATCACTAGCAACAATGTTGTGCCAGCAAATTGGCAATTTGGACAGACCTTCCAGGGTGGGCAATTTTAG 756 0.4775 MAITATFSAFSLFFLLLNLQGSFGDDGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCSGDPKWCLPGSIIVTATNFCPPNFALANNNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPISFRRVSCVKKGGIRFTINGHSYFNLVLITNVGGAGDIHSVSIKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSNNVVPANWQFGQTFQGGQF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1422 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 159 IPR007112 -
Mibi08g1422 251 SUPERFAMILY PHL pollen allergen 156 248 IPR036749 -
Mibi08g1422 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Mibi08g1422 251 SUPERFAMILY Barwin-like endoglucanases 13 177 IPR036908 -
Mibi08g1422 251 SMART dpbb_1 64 149 IPR007112 -
Mibi08g1422 251 Gene3D - 18 154 IPR036908 -
Mibi08g1422 251 FunFam Expansin 18 155 - -
Mibi08g1422 251 Pfam Expansin C-terminal domain 160 237 IPR007117 -
Mibi08g1422 251 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin signature 86 97 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Mibi08g1422 251 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Mibi08g1422 251 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Mibi08g1422 251 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Mibi08g1422 251 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Mibi08g1422 251 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Mibi08g1422 251 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Mibi08g1422 251 PANTHER EXPANSIN-A15 12 251 IPR002963 GO:0009664
Mibi08g1422 251 FunFam Expansin 159 251 - -
Mibi08g1422 251 Pfam Lytic transglycolase 64 148 IPR009009 -
Mibi08g1422 251 Gene3D - 158 251 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1422 Mibi-ChrMibi08 30333870 30335069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1422 4 251 Expansin Gene Family AT2G40610 80.478 1.02e-152 423