Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1399 ATGTCAAGGGAAAACTTTGAAGAGATAGGGAAGAAGATCAAGAGGGAGGGAGATGTTTCATCACAAATGGGAAGAAGACACATGTTGGGCCCACCAGGAACCCTAAATACCATAACCCCTTGTGCAGCATGTAAGCTCTTGAGGCGAAGATGTGCTCAGGAATGTCCCTTTTCTCCTTACTTTTCCCCCCATGAGCCCCAAAAATTTGCTTCTGTTCACAAGGTCTTTGGTGCTAGCAACGTCTCCAAGATGCTCATGGAGGTACCAGAGTGTCAAAGAGCTGATGCAGCAAATAGTCTAGTGTATGAAGCAAATGTGAGGCTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCTGCTTTGCAGCAACAAGTTCAATCTTTGCAAGCTGAACTTAATGCAGTAAGGGCTGAAATACTTAAATACAAACTTAGGGAAGCTACTAACATCATACCCTCCTCTCATCACCATCATCATCATATTCATCCTATCCTCCCTAATTCCCCTCAAGCAGTGTCAATCGCCGCCCCACCGCCACCGCCACCTCCTCCTCCACCGCCTTCTCTTCCTTCTGCTTCTGATTCATCTTCTTCCATGTATACCCAAGTCCAGCAGAGGCCTCCTCCCACCAATTTTACCACAATTTCAAGTGATAATATTTCCTATTTTGGTTGA 678 0.4543 MSRENFEEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKYKLREATNIIPSSHHHHHHIHPILPNSPQAVSIAAPPPPPPPPPPPSLPSASDSSSSMYTQVQQRPPPTNFTTISSDNISYFG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1399 225 MobiDBLite consensus disorder prediction 173 192 - -
Mibi08g1399 225 ProSiteProfiles LOB domain profile. 39 140 IPR004883 -
Mibi08g1399 225 PRINTS Wilm's tumour protein signature 174 188 - -
Mibi08g1399 225 PRINTS Wilm's tumour protein signature 122 138 - -
Mibi08g1399 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 36 180 - -
Mibi08g1399 225 Coils Coil 119 146 - -
Mibi08g1399 225 MobiDBLite consensus disorder prediction 155 225 - -
Mibi08g1399 225 MobiDBLite consensus disorder prediction 1 22 - -
Mibi08g1399 225 MobiDBLite consensus disorder prediction 193 225 - -
Mibi08g1399 225 MobiDBLite consensus disorder prediction 1 31 - -
Mibi08g1399 225 Pfam Lateral organ boundaries (LOB) domain 40 137 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1399 Mibi-ChrMibi08 30102073 30105098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1399 25 155 AS2 family AT2G40470 90.226 7.23e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi08g1399 LOB 2.7e-40 No_clan