Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1392 ATGGTTTCTAATAAAGAACACAAGAAGAGAGAATCTCTGCACGAGAAGCTCCAACTCCTTCGTTCTATTACTCACTCTCATTCTCTAGACAAAACCTCGATTATATTGGACGCAACAAAGTACATTGAAGAGCTAAAGCAAAAGGTAGAAAGACTGAATGAAGACATAGCCACTAGTGCAGAAACTTCAAAAGACCAAAACCATGTGCCTATGGTTACAGTAGAAACCCTAGAAAAGGGATTTCTGATAAATGTGTATTCAGCCAAGAGTTGCCCAGGTCTGCTGGTTCCCATATTGGAAGTCTTAGAAGAGATGGGTCTCAACGTTATGGAAGAAGAAGAGGAAGAAGGTGGTAGCATGGATGCAGAAGCAGTGACACAAGCAGTGGGAAGAGCCATAAAGAATTGGAGAGAGAGTACGAGCCAATAG 429 0.4196 MVSNKEHKKRESLHEKLQLLRSITHSHSLDKTSIILDATKYIEELKQKVERLNEDIATSAETSKDQNHVPMVTVETLEKGFLINVYSAKSCPGLLVPILEVLEEMGLNVMEEEEEEGGSMDAEAVTQAVGRAIKNWRESTSQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1392 142 Gene3D - 3 69 IPR036638 GO:0046983
Mibi08g1392 142 Coils Coil 35 62 - -
Mibi08g1392 142 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 57 IPR036638 GO:0046983
Mibi08g1392 142 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 6 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1392 Mibi-ChrMibi08 30002530 30003950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1392 13 109 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 31.193 6.71e-07 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1392 08 30002530 30003950 Mibi08g1392 08 30002530 30003950 CCT
Mibi08g1392 08 30002530 30003950 Mibi08g1392 08 30002530 30003950 ECH
Mibi11g0332 11 5257284 5258688 Mibi08g1392 08 30002530 30003950 ECH
Mibi05g1198 05 14332691 14334267 Mibi08g1392 08 30002530 30003950 ECH