LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi08g1372	ATGTTGCCAAAACGTCAACCAGGAAATGGAATGTACTCTTTGGATGTGGACGCCAAAGGGAACATGAACATGTGTTTGTACATCGACAGAGACACAGGTTCTAAGGGTATATTCTATGGAGACACACCATTTCAATTCCCACTTCCTGTCACCTTATTCCAAGTCTTCTTCATCTCTCTCCTCTCCCAACTCGTCTTCTTCGTCCTCAAGCCCATCAGAACCCCCAGATACTTGTGCCACGTCATTGCGGGCATTATGGTGGGGCCCTCGTTTCTGGGGAACAACAAGTTATTCAAGGAGAATGTGTTCATGCCGATGCAGTTTAATGTGTTGTCCGTGGCATCATTAATAGGAATTATATACGCACTTTTTATCCTCGCGTTAAAAATGGATGTGGTTTTAACGTTAAGATCCGCAAGAAGAACATGGAAGCTAGGTTTATTATCTTCCTTGTCCAGTTTCTGGGTTATGTTCGGTCTTCTTTCATTGGTTATCCCTAAGAATATCCCCAATTTTCCAAGTGTACGTGACAGAGTTCTTCTATGTGCCAATGTCTCTTTGAGTAATTTCGCAGTTATATCTCAGGCCTTAATGGATCTCAACCTTATTACCTCCGAACTTGGTCAAATTGCTCTGTCTGCTTCAATGATCAACGACATTTTCCACGCACTATTTTATTTGGGATTGTATATTGTTCGTAGCAAAGAAGTAGGATCCAAAGCTCATTCACCTTTGTTCATATTCATAAGCTTTTGGGGATTCATAGGTTCTTTAATATTTCTTGTTCGCCCAGGCTTGCTCATGATTGCCAGAAATACCCCCACAGGGAAGCCTGTGAAGAAGGCTTATGTTGTAATGATACTCATGGGTGTTCTGGTTACGGCATTAATAACAGATGTTATTGGCTTATCTTTTTTGTTTGGGCCCATGTTTTTTGGTTTGATTATGCCCAATGGGCCTCCTTTGGGTACTACGATTTTGGAGAAAAGTGAGACTTTGATGAATGAGTTCTTTCTTCCCTTGGCCTGGGCTTTCTTGGGACAGACGATAAATCTGGCTGGAATCTGGAACTGGGACATGGTTTTCAAGGTTAACTTCGTCATTCTCGCGGGGTACATAGCCAAAGTGATTGGTTGCGTTCTAATCTCTTTCACCTGCAAAATTAGGCCCAAACATGGCCTCATCCTCGGTCTCATGCTCAACATCAAGGGCTTCGTCGAGATCATCAATTATACACGAATGCAGAGAACTCAGATCTTGGACGATCAAATGTATTATATTTTGGTGTTCTCTACCGTGATTACATCCACAATTCTGAATCCTTGCATTGACTATCTATACAAGCCTTATACACGATTGGACAGTCCCAAAAAAGGTTTCCGACAGATAAGAACAATCCAAAGCACTTTCAAGAACCCAGAATTTTGCATCTTATGTTGTGTACACAGTGAAGGGAATGTTCGAAGCCTCATGTCCCTACTAGAAGCATGCAACCCAATCATGTCAGGTTCAATATGTGCTTACGTGGTACATCTCGTAGAGCTCCTAGGCAAAAGCACACCTTTTCTCCTCCCAGTGAAAATGAAAAGAAAAAGATTCTCTTCGTTGAATTACCCCATCACCCTCCAAATCATGCGAGCCTTCGAAAATTACGCATCTAACACAGATGGAATCGTCACTGTTTTGCCCTACATCAATGTGGCACCTTATAAGAACATGCACGAGGCTGTGTGTAACCTCGCGCAGGATAAACTAGTATCCTTCATAATCCTCCCATTCCATGAGAATGATCAGTCACGTGGTAGTCTCATGACTGCCACCATACGTGACCTCAACAGGAACTTCCAAGTCTATGTGCCATGCACGGTTGGAATCCTCGTGGACCGGTTCTCCCAGCTCAGCATAAGCAATGCCACGGGTGGCGGGCCCACGTTCCACGTGGCGGTGTTCTTCCTCGGTGGGCCCGACGATAGGGAGGCCCTCGCGCTGGCCAGCCGGATGTCGGACCGCCCTAATGTGAGGGTGTCATTGTTCTACTTTGTGGTGGTGAAGAGTGATTTGGTGAAAGATGAGAAAAGTAGTGATAAAAGCCCAGATGATGATAGTGATGACATGTTTAGTAGGTATGAAAGGGAGATGCATGAGGAAGAAGAGAGGAAGTGGAATGAGAGTGTGATTGATGAGTTCAAGGCAAAGAGTTTAGGGAATGACAATGTGTTGTGTGAGGAGGTAGTGGTGGAGGATGGGATTCGGGTTTTGGAAGAGATAAGGAGATTGGAGGGAAGTTATGATTTGGTGATGGTGGGGCAGAAACATAATATGGAGGGTTTGGATGATAGAGGGATGTGTAATTTAATGGAGAACGTGGAAACGTTGGGGATTGTTGGGGATATGTTGGCTTCTACAGAGTTTTGTAATGGGATGATTCCTGTTTTGGTTATGAGATGTCCTACGCAGCAATTGAAAAGGAGTAATAGCTTAAACTCCATTGCTGTCTCCCATAGCAGTTTTCGTTGA	2517	0.4394	MLPKRQPGNGMYSLDVDAKGNMNMCLYIDRDTGSKGIFYGDTPFQFPLPVTLFQVFFISLLSQLVFFVLKPIRTPRYLCHVIAGIMVGPSFLGNNKLFKENVFMPMQFNVLSVASLIGIIYALFILALKMDVVLTLRSARRTWKLGLLSSLSSFWVMFGLLSLVIPKNIPNFPSVRDRVLLCANVSLSNFAVISQALMDLNLITSELGQIALSASMINDIFHALFYLGLYIVRSKEVGSKAHSPLFIFISFWGFIGSLIFLVRPGLLMIARNTPTGKPVKKAYVVMILMGVLVTALITDVIGLSFLFGPMFFGLIMPNGPPLGTTILEKSETLMNEFFLPLAWAFLGQTINLAGIWNWDMVFKVNFVILAGYIAKVIGCVLISFTCKIRPKHGLILGLMLNIKGFVEIINYTRMQRTQILDDQMYYILVFSTVITSTILNPCIDYLYKPYTRLDSPKKGFRQIRTIQSTFKNPEFCILCCVHSEGNVRSLMSLLEACNPIMSGSICAYVVHLVELLGKSTPFLLPVKMKRKRFSSLNYPITLQIMRAFENYASNTDGIVTVLPYINVAPYKNMHEAVCNLAQDKLVSFIILPFHENDQSRGSLMTATIRDLNRNFQVYVPCTVGILVDRFSQLSISNATGGGPTFHVAVFFLGGPDDREALALASRMSDRPNVRVSLFYFVVVKSDLVKDEKSSDKSPDDDSDDMFSRYEREMHEEEERKWNESVIDEFKAKSLGNDNVLCEEVVVEDGIRVLEEIRRLEGSYDLVMVGQKHNMEGLDDRGMCNLMENVETLGIVGDMLASTEFCNGMIPVLVMRCPTQQLKRSNSLNSIAVSHSSFR	838

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi08g1372	838	PANTHER	CATION/H + ANTIPORTER	32	814	-	-
	Mibi08g1372	838	Pfam	Sodium/hydrogen exchanger family	55	439	IPR006153	GO:0006812\|GO:0015299\|GO:0016020\|GO:0055085
	Mibi08g1372	838	Gene3D	-	50	455	IPR038770	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi08g1372	Mibi-ChrMibi08	29790512	29793625	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi08g1372	34	815	Antiporter Super Family	AT2G13620	32.702	6.63e-137	425