Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1366 ATGGGAGGCACTTCCCCTTGTGCTTCATGCAAGTTACTACGACGCCGTTGCGCCAAAGATTGCATATTTGCTCCTTATTTCCCTTCTGATGACCCTCAAAAGTTCGCCATCGTTCACAAAGTCTTCGGAGCTAGCAACGTCGGCAAAATGTTGCAGGAGCTTCCAGTTCATCAGAGAGCAGACGCAGTAAGCAGTTTAGTGTATGAAGCAAATGCTAGAGTTAAAGACCCTGTGTATGGTTGTGTCGGGGCCATATCTTTTCTGCAGAATCAAGTTTCAGAGCTTCAAATGCAGCTAGCTGTGGCTCAGGCAGAGATCCTCTGCATCCAGATGCAGCAGGAACCTGAACCTGTTATGCAAAACCCAGAACTCGTCAATGACCCCAATCATCATAACCATCAGAAACAACCTTATTTTCTGCAAAACGACCAGTACCTTACCTTTGCTGCTTCTTCCAGCAATGTAATTCAGGACTCTCTTCAGAGAGAGAGCTTCTTTGGACACGACATGGTTTCTTAA 519 0.4605 MGGTSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVGKMLQELPVHQRADAVSSLVYEANARVKDPVYGCVGAISFLQNQVSELQMQLAVAQAEILCIQMQQEPEPVMQNPELVNDPNHHNHQKQPYFLQNDQYLTFAASSSNVIQDSLQRESFFGHDMVS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1366 172 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Mibi08g1366 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 136 - -
Mibi08g1366 172 Coils Coil 85 105 - -
Mibi08g1366 172 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1366 Mibi-ChrMibi08 29716905 29717532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1366 3 115 AS2 family AT2G30130 91.150 7.10e-74 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi08g1366 LOB 3.4e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1366 08 29716905 29717532 Mibi08g1366 08 29716905 29717532 ECH