Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1357 ATGAGAAGCATGAAAGGATACGAACCCCGTTCAAGTTCTTCCTGCGCCGCCTGCAAACTCCTCAAACGTCGCTGCACCCCCACCTGCATCTTCGCCCCTTACTTTCGCTCCGATGAGTGCAAGAAATTCGCCAAAGTCCACAAAGTCTTCGGAGCCAGCAATGTCAGCAAGATCCTCTTCGAGGTTCCTGAGGAACAACGTGAGGACACTGTCAATTCTCTTGCCTATGAAGCTGATGCTAGGCTCAAAGATCCTGTTTATGGATGCATTGGTGCTATTGCTCTGTTGCAGACAAAGATGGTGGAGCTTCAACATGATCTTGCTGTTGCCAAGGCTCGTCTTGCTCGTTATTCTTCCTCCGTTGCCCCCTCAACCGTTGCTGCTGCTGATGATGACTGCTTCATTACCTTCCCTTCTTCTTCTTCCTCCATTGACCATAGCTTTTTCCCTGCTGCTCATGTGGGCCTGCCTCCTTTCCCTGACTGTTCTTCTTCCTCTTGCTGTGATGTGGATGATGGGTTTTCGTCTTCTCAGGTTCAGTTATCGAGCCGACATGATATGGTGGATGATTTTTTTCAAACCCCATATATATTTTGA 597 0.4858 MRSMKGYEPRSSSSCAACKLLKRRCTPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEEQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMVELQHDLAVAKARLARYSSSVAPSTVAAADDDCFITFPSSSSSIDHSFFPAAHVGLPPFPDCSSSSCCDVDDGFSSSQVQLSSRHDMVDDFFQTPYIF 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1357 198 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Mibi08g1357 198 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Mibi08g1357 198 Coils Coil 93 113 - -
Mibi08g1357 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1357 Mibi-ChrMibi08 29652527 29653123 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1357 4 131 AS2 family AT3G11090 77.344 5.56e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi08g1357 LOB 2e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1357 08 29652527 29653123 Mibi08g1357 08 29652527 29653123 ECH