Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1355 ATGACAAGCCAGCAAGATGCTCAGGTGTTCAATTGGCACTACACAGAGCTGGATAACCATAACCTAGAAGTCCGAAGCAGAAAAGTTCTGTTCATCATCTTCCTTTTCTGTTTGATTCTCATCATGATTCTTCTCTTCCTCTGCGCCCGATGGATCTGCCGTTACCGTGACCACCTTCCTGTCACTTTTCACTCCAGTCAGGTGCGTCACGCGCCGTCTCCGCCGTCGCAGGGCCTAGATCCAGATTCGATCAAGAAATTGCCGATAATCTTGCATCAGGCTCCGTCGGAGGAATCCGATTGTGCGTTGGAGGAAACAGAGTGTTGTATTTGCCTTAGTGTGTTTGAAGATGGTGAGAAATTGAAGGTGTTGCCTGGTTGCAAACATTGTTTTCACTGTTTGTGTGTGGATAACTGGCTTATTAATCACTCCAGTTGTCCGCTCTGCAGATCTTCTATCAAAGTTGATGTTGATTCTTCTTCGTTTCCTGAGATTTTGATTCAGGAACCGCCGATTAGAATCGACCTTCAATTTTAG 537 0.4581 MTSQQDAQVFNWHYTELDNHNLEVRSRKVLFIIFLFCLILIMILLFLCARWICRYRDHLPVTFHSSQVRHAPSPPSQGLDPDSIKKLPIILHQAPSEESDCALEETECCICLSVFEDGEKLKVLPGCKHCFHCLCVDNWLINHSSCPLCRSSIKVDVDSSSFPEILIQEPPIRIDLQF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1355 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 156 IPR013083 -
Mibi08g1355 178 SMART ring_2 108 149 IPR001841 -
Mibi08g1355 178 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Mibi08g1355 178 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 157 - -
Mibi08g1355 178 Pfam Ring finger domain 107 150 IPR001841 -
Mibi08g1355 178 SUPERFAMILY RING/U-box 99 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1355 Mibi-ChrMibi08 29591842 29592378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1355 3 159 C3H Transcription Factor Family AT3G11110 40.764 9.25e-33 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1355 08 29591842 29592378 Mibi08g1355 08 29591842 29592378 CCT