Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1354 ATGGTCCTCACCTCAATTAACAACGTCGCTTCCAATCGTGTAAAAGGCTCATGGAGCCCACAAGAGGACGCCAATCTAGTCAAGCTCGTCCACCAACACGGTCCTCGCAACTGGTCCCTCATCAGCGCCGGCGTACCTGGCCGCTCCGGCAAGTCTTGCCGCCTCCGGTGGTGCAATCAGCTAAGCCCCGCCGTTCACCACCGCCCTTTCACCCCCTCCGAGGACGCCATCATCATCAAGGCTCACGCCGTCCATGGAAACAAGTGGGCCACCATTTCACGCCTCCTTCCCGGCCGTACGGACAACTCCATTAAGAACCACTGGAATTCCACCCTCCGCCGCCGCCGCCGTGCGGCGGAGACCTCGACTGCGTCCGGATCTTCGGGATCGGAATCGGTTTTGGCGACGAAGGATCGGGCGGAGCATTGTGAGCCGTTGGATCTGGATGAGTCGGGGCGGAGATTGAAGCGGCGGAGGATTTCGCCGGAGAAGAAGGGTTTGAAGGATCCTGTGACGACGTCGTTGAGCTTGTTACCTCCGGGAGAGAACAAAGTGAAGGAGGAGGAAGAAGAAGATGAAGAAGGTGAAGGAAGTGAGATTGAGGCGCGAAAGGAGGAGGAAGAGATGGGCCTGATGATGAAGATGATGAAGAAATTGATATCTGAGGAGGTTAGGGATTACGTTGACAGTTTGCGGGCCGATGATAAGCTTCTTCTCAGGACTGGGCTGGGCCTTCCTTCTTCTTAA 747 0.5663 MVLTSINNVASNRVKGSWSPQEDANLVKLVHQHGPRNWSLISAGVPGRSGKSCRLRWCNQLSPAVHHRPFTPSEDAIIIKAHAVHGNKWATISRLLPGRTDNSIKNHWNSTLRRRRRAAETSTASGSSGSESVLATKDRAEHCEPLDLDESGRRLKRRRISPEKKGLKDPVTTSLSLLPPGENKVKEEEEEDEEGEGSEIEARKEEEEMGLMMKMMKKLISEEVRDYVDSLRADDKLLLRTGLGLPSS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1354 248 MobiDBLite consensus disorder prediction 107 206 - -
Mibi08g1354 248 Gene3D - 14 66 - -
Mibi08g1354 248 MobiDBLite consensus disorder prediction 186 201 - -
Mibi08g1354 248 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi08g1354 248 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Mibi08g1354 248 PANTHER MYB PROTEIN-RELATED 15 149 - -
Mibi08g1354 248 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi08g1354 248 Gene3D - 68 139 - -
Mibi08g1354 248 FunFam MYB transcription factor 15 66 - -
Mibi08g1354 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 65 IPR017930 -
Mibi08g1354 248 CDD SANT 17 59 IPR001005 -
Mibi08g1354 248 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
Mibi08g1354 248 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mibi08g1354 248 MobiDBLite consensus disorder prediction 135 166 - -
Mibi08g1354 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 116 IPR017930 -
Mibi08g1354 248 CDD SANT 69 112 IPR001005 -
Mibi08g1354 248 SMART sant 14 63 IPR001005 -
Mibi08g1354 248 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1354 Mibi-ChrMibi08 29585468 29586214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1354 13 129 MYB Transcription Factor Family AT4G37260 67.521 1.94e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g1354 Myb_DNA-binding 2.3e-17 CL0123