Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1353 ATGGAAAACTTCTACTATTCTAGTTCTGGTTCTAGCAACTGGTGGCCAGTGCAGGGCAAAAACAGTAGTAATAACAATAATAATGTTCCTTCTCCTTTCTCAGTGCAAACTCCATTGTTGCCTCATCACAACATCCCTGATTCATGTTCTGTTCAGTTCTGTGATCAGTTCCCTCATCATTCATGGCTTCCTTCTGAAGAAGATAAAGCATCCAGTGCCTCCAAGAGCCATAGCCAAGCTGAGAAACGCCGTAGGGACAGGATTAATGCCCAGCTTGCCTCTCTCAGAAAACTCATCCCCAAGTCTGATAAGATGGACAAGGCAGCATTACTGGGGAGTGTGATAGAGCAAGTGAAGGATCTGAAAAGAAAAGCCATGGATATAGGAACATCCATCACAGTCCCAACAGAGATAGACGAAGTATCAATAATAGACCAAGAAGAAACCTCATTAAGTTCATCATCGTCAACCTCAATCATCAACAATAATAACAACAAAGTGATGAAAGGAAACAAGAACAAGAACATAGTGATAAGAGCTTCAGTTTGCTGTGAGGATCGACCAGAACTATTCTCAGAACTCATCAAAGTTCTTAAAGGCCTGAGGCTAACGGCAGTGAAAGCTGACATAGCAAGTGTGGGAGGGAGAATTAAAAGCATATTGGTTCTGTGTTCTAAGGATAGTGATGATAGTGTTTGTGTTTCTACTCTTAAGCAGTCTCTTAAATCAGCTGTCACTAAAATTGCTGTTTCATCTTCATCAATGGCTTCTTCTTGTCCTGCAAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCCTCTTGCCTCCATTGA 831 0.4176 MENFYYSSSGSSNWWPVQGKNSSNNNNNVPSPFSVQTPLLPHHNIPDSCSVQFCDQFPHHSWLPSEEDKASSASKSHSQAEKRRRDRINAQLASLRKLIPKSDKMDKAALLGSVIEQVKDLKRKAMDIGTSITVPTEIDEVSIIDQEETSLSSSSSTSIINNNNNKVMKGNKNKNIVIRASVCCEDRPELFSELIKVLKGLRLTAVKADIASVGGRIKSILVLCSKDSDDSVCVSTLKQSLKSAVTKIAVSSSSMASSCPARSKRQRFFLPSSCLH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1353 276 Pfam Helix-loop-helix DNA-binding domain 75 121 IPR011598 GO:0046983
Mibi08g1353 276 CDD ACT_UUR-ACR-like 181 216 - -
Mibi08g1353 276 MobiDBLite consensus disorder prediction 63 86 - -
Mibi08g1353 276 SMART finulus 78 127 IPR011598 GO:0046983
Mibi08g1353 276 MobiDBLite consensus disorder prediction 16 35 - -
Mibi08g1353 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 124 IPR036638 GO:0046983
Mibi08g1353 276 Gene3D - 66 128 IPR036638 GO:0046983
Mibi08g1353 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Mibi08g1353 276 PANTHER TRANSCRIPTION FACTOR BHLH30 50 271 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1353 Mibi-ChrMibi08 29579691 29580968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1353 1 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 41.259 1.30e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi08g1353 HLH 3e-10 No_clan