Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1342 ATGAGGGGAGAAGACGCTGTGGCCACCACCGGAACCACGTACATTACTGCCTCGTTGCCGGAAATCGAAAACCCAAACACCATTCTCGTCACGTTGAATCCACCAAGCCATGCTCCTCTTATTTCTTCCCTCCTTTTCCAATTTTACCCCCTCCCTCTCTTCTCACGTCTTCTGTTCATGGCGCTCTCCGATGTCGACGCCGTCATCCGTTTCTTGCGCAAAAATGGCTTCTCTGAGGCTGAATCTGCCCTCAAACAAGACATCATCGAAAAGGGTCATCTGGGTTCCTTTGACTACGAGAAATTCTTCTTCCCTATGGTTCCCCCTCCGCCGCCGGTCAAAGTCCGATCGATTTTCCGGCGGTCCCCCGCCGCAGACAGCTCCTCCGAAGATGAGTTTGTGAGCTTGAGCTCTTCTACTTCTGATGTTTGCTCTTCTGAGTTCATAAATCCATATGGGATCCGTTCCTCGTCTCAGAATGATTCTGAATCTTCCTCTGATAATCAATTTGGAACGGCTCGAGATCACCATGAATTTGATAAGAAAAACGAATCGTATTGGTACAATGAGAAAGAGGATGATGACGACGATGATGACGACAGCAGTTTTATGACTCCAAGCTTTGAGGGGCCTGATTTTTTTAGATCTCCAACCGAGGATAAGTTCATAACGACATCATCAGAAATGGACAATCAGAAGAACGTGAATCCTCTGAATCTTAGTCATATCCCTGAAGGATCTCATTCAGAGGAGGAAAATGGTGATTGTATAGACAAGACTTGCCTTCCCAATAGTGAGGAAGATCAGCTCAAAGCTGGATTGTTGGAAAAGGAAATTCATCTGAATAATTTTGCTGCCTTGGCAAATGGTACTATGGACCAAACGTTTGACCTTCACTCGAGCACTGGTATTAGTAAAGGGAATAACGATTCCTATGACTTGACGATCGAAGTAGATGAAATCAACAGTTTGGAAGATCGAGATGATAAAAAATTAACTGAAGAATGTCATGAATCAGATGATGCTGAAGATATCACTGATGATGAACTGATCAAGTACATTCCTGAGGATGATTATGAAGTATTTGACTTAAGAATTGTTCATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAAGATTTTCCGATTGTACTAAATACAGTTATAGCTGGCAGATACTGCATTACAGCTTATCTTGGTTCAGCAGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAAACTGGAGTAGATGTTTGCTTGAAGATAATAAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAACTTCTTAAACTTGTCAATAAGAATGACCCGGCTGATCGATTTCACATACTGCGTCTTTATGACTACTTCTATAGTCAGTTGAAAACTTCACAGGAACATCTATTCATTGTTACCGAGCTTCTGCGAGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTAATGGTGAAGCATATTTTACAATGAGCAGGTTGCAGCACATTACTCGTCAATGTTTGGGGGCATTGCAATACTTGCATAGCTTAGGGATCATTCATTGTGATCTGAAACCAGAAAACATTCTGATAAAAAATTACAAAAGATGTGAGATCAAGGTCATTGATCTTGGAAGCAGTTGCTTTCAGACAGATAACTTATGTCTGTATGTGCAATCTCGATCCTATCGGGCTCCTGAAGTGATACTAGGCCTCCAATATGATGAAAAGATCGATATATGGTCCCTTGGCTGCATCTTAGCTGAACTATGCTCTGGCGAGGTGCTCTTTCCCAACGATGCAGTCGTCATGATTCTTGCGCATATGATTGGAATGCTTGGTCCTATTGATCTTGAGATGTTGGTGAAAGGACAGGAAACTCAAAAATACTTCACCAAGGAATTTGATATTTATTATGTCAACGAGGAGACAGATCAAGTTGAGTATATAATTCCAGAGGAGTCATCACTGGAGCAGCATTTGCAGGTTACAGATACTATGTTCATAGATTTTGTAAGATACTTGCTTAGCATAAACCCCAAAACAAGACCTAATGCAACACAGGCTTTGAGACATCCTTGGCTTTCTTATGTCTACAAGTCCAAGGACAAGAATAATGGTCGTTATTTCTGA 2148 0.4125 MRGEDAVATTGTTYITASLPEIENPNTILVTLNPPSHAPLISSLLFQFYPLPLFSRLLFMALSDVDAVIRFLRKNGFSEAESALKQDIIEKGHLGSFDYEKFFFPMVPPPPPVKVRSIFRRSPAADSSSEDEFVSLSSSTSDVCSSEFINPYGIRSSSQNDSESSSDNQFGTARDHHEFDKKNESYWYNEKEDDDDDDDDSSFMTPSFEGPDFFRSPTEDKFITTSSEMDNQKNVNPLNLSHIPEGSHSEEENGDCIDKTCLPNSEEDQLKAGLLEKEIHLNNFAALANGTMDQTFDLHSSTGISKGNNDSYDLTIEVDEINSLEDRDDKKLTEECHESDDAEDITDDELIKYIPEDDYEVFDLRIVHRKNRTGFEESKDFPIVLNTVIAGRYCITAYLGSAAFSKVVQAHDLQTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADRFHILRLYDYFYSQLKTSQEHLFIVTELLRANLYEFQKFNQESNGEAYFTMSRLQHITRQCLGALQYLHSLGIIHCDLKPENILIKNYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVILGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILAHMIGMLGPIDLEMLVKGQETQKYFTKEFDIYYVNEETDQVEYIIPEESSLEQHLQVTDTMFIDFVRYLLSINPKTRPNATQALRHPWLSYVYKSKDKNNGRYF 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1342 715 SMART serkin_6 393 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1342 715 ProSiteProfiles Protein kinase domain profile. 393 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1342 715 MobiDBLite consensus disorder prediction 154 169 - -
Mibi08g1342 715 PANTHER DUAL SPECIFICITY PROTEIN KINASE 158 700 - -
Mibi08g1342 715 SUPERFAMILY Protein kinase-like (PK-like) 381 705 IPR011009 -
Mibi08g1342 715 FunFam Serine/threonine-protein kinase ppk15 477 701 - -
Mibi08g1342 715 Gene3D Phosphorylase Kinase; domain 1 388 479 - -
Mibi08g1342 715 CDD PKc_DYRK_like 393 700 - -
Mibi08g1342 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Mibi08g1342 715 Gene3D Transferase(Phosphotransferase) domain 1 447 700 - -
Mibi08g1342 715 FunFam Putative serine/threonine-protein kinase dyrk2 387 479 - -
Mibi08g1342 715 Pfam Protein kinase domain 397 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1342 715 MobiDBLite consensus disorder prediction 154 218 - -
Mibi08g1342 715 MobiDBLite consensus disorder prediction 170 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1342 Mibi-ChrMibi08 29410881 29414860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1342 390 695 MAP Kinase Gene Family AT5G19010 31.307 3.46e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mibi08g1342 Pkinase 7e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1342 08 29410881 29414860 Mibi08g1342 08 29410881 29414860 ECH