Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1339 ATGAAGAAGGCGCGTGAGGCCCAAAATGAAAGTGACACGTGGCTGTCGGCGGAAGCCACACCTTCATGGGTTCTATATCCTTCGTGTTTGTCCCAACGCCTTGTTTGGTTTCACTACCATATGCTTCCAAACCTATCTCCCTCTTCCCCAACCTTTTAAGACGAAGAAGAAGGCCATGTCTCCTTAAGTCTAAACCAAACCCCTGAAAAATTCCACCATGCCTTTTCCTCCTTATTTACTCTCACATTCTCTCTCCTCTCCCCCATCTCCATTCTCTCTCCCTCTTCCCCATTCCCCATCTCTCCCAATGAAGCACAAACCACCTCCACCCAAAACCCAAACCCAAACCCACCCTCTTTCATGACGATTTCACTCTTCACCTTCTTCTCCTTCATCGTCTTCTTCTCTGCAACCCCTTTAACCCATGCTCTCGGTTCCGCCTCCACCCTCGCCGTAATCGATGATTCCGCCACCGTATGTGGGATCGTCGCTGGCGAATCAATCCGTCGCATTGAATGCTACAGCCGAGGACAGATCTTGCCTGTTACTCCTAACATTTCGTTTTCTTCTATTTCCGGTGGGAGGAGCTATTTCTGTGGCCTTAGGTCCGGTAACTACAGTTTACTCTGCTGGGATTCTGTATCTTCCAATTCTAGTGGTCCCTTACAAGGGAAGAGGATTTACTCTAATTTCAATGTTCTTTTGGAGAATCTTTCTGTTGGGGATACCCAAGTTTGCGCCACCGTCGTTGGTTCCGGCGATGTTCGGTGTTGGAGACCTAATGACATACGTACGGCGGATCAGTTTGTGACTTTAACATCTGGGTATGGTTTTTCTTGTGGGATTTTGAAGAATACTTCTCGTGTTCATTGTTGGGGAATGCGACAACCCCTCGTAGATCAAATAGTGAATGGATTTGGGGGTATGCCTATGTTGAGTCTTGTTGCCGGGGATTCACATGTTTGTGGATTGAATTCAACTGGGTTTGTGGTATGTGGAGGGAGTAATAGTTCTGGTCAGCTTAATGTTCCACAAGGAGGAAGACCTATGGAGTTTTCTGGGTTGGCTCTTGGAGCTGAACATTGTTGTGCGATCAGAGAATCGAATCGTTCGGTTGTTTGCTGGGGAGGCGGAGGGAGATTCTCGGAGAGTTTTACGGAAGGAACATCTTTTGAGTTGATTGTTTCTGGGTCAAATTTTACTTGTGGATTAGTGTCTGGTGATTTTTCTGTAATGTGTTGGGGACCTGGTTGGGTTAATAATAATAGTTCTGCTTTTAATAATCCATTTGAGCTTCCTTTATCTCCTATTCTCCCTGGACCTTGTGTTCAATCTTCTTGTGAGTGTGGTCAATATCCTCAATATCAAAATCTTTGTTCTGGCTCTGGTACTATTTGCAGGCCTTGTTATCCAAACATTTCAGCCCCAGGGTTGCCGCCTTCGACTTCTCCGCCACCGCCATTGGTTTCTCCTCCTCCGTCGTCCCGGTCAAAGACATTGACAAGGGGTTTATTGGCATTTGCCATTGTTGGATCTGTCGGAGCTTTTGCCGGCATATGTACTATAATTTATTGCTTGTGGACTGGAGTCTGTTTTGGTAAGAAGAAAGTTCACAATTCTGTTCAACCCAGAATCAATAGAGAAGGTAGCTCCAATAATGGAGGAGGTATCATAAATTCTAGCAGTAGCCCGCCTTCGAGATCATCCACCATTAGGCGTCAAGGCTCGAGGATAATGAGGCGCCAGAGGAGTGGAACATCATCCGCAAAACATCCTGATAGGGCAGAGGAATTCTCCTTAGCAGAGCTTGTGGCAGCCACTAATAATTTTTCCCTGGAAAACAAGATTGGTGCTGGTAGCTTTGGTGTTGTGTATAGAGGAAAACTCGCTGATGGTCGAGAGGTGGCGATCAAGAGGGGTGAGATTGGTTCAAAGTTGAAGAAGTTTCAGGAGAAAGAGAGTGCATTTGAGTCAGAATTGGCATTCTTGTCCCGCTTACACCACAAACACTTGGTCAGGCTAGTTGGATTTTGTGAGGAGAAAGAAGAGAGGCTCTTGGTGTATGAATACATGAAGAATGGAGCATTACATGATCATTTACATGCCAAGAACAATGTGGAGAAGAGCAGTAGTTTCTTGAATTCATGGAAAATGAGGATCAAGATTGCGCTGGATGCTTCTCGGGGGATCGAATACCTCCACAACTATGCAGTTCCACCCATAATTCACAGGGATATCAAGTCTTCCAACATTCTCCTCGATGCGAATTGGACAGCGAGAGTATCTGATTTTGGATTGTCATTGATGGGTCCTGATTCTGATTCCGATTACCGGCCTGCAAAGGCGGCCGGAACCGTGGGATACATTGATCCTGAGTACTATGGTCTGAATGTCTTGACAGCTAAGAGTGATGTCTATGGGTTTGGAATAGTACTGCTAGAACTCTTAACTGGAAAGAGGGCTATATTCAAGCATGGTGAAAATGGTGGCACCCCAGTGAGTTTGGCGGACTACGCGGTGCCTGAAATAATGGCCGGCGAATTGCCCAAGATTCTGGACGGTCGGGTCGGGCCACCGGAGATGAATGAAGCGGAGGCGGTGGAGCTGGTGGCCTATACCGCCATGTACTGCGTGAGTTTGGAGGGGAAGGATAGACCAACGATGACTGACATTGTGGCCAATTTGGATAGGGCTTTGTCTCTGTGTGATAGTAGTCATGGAAGCATCTCCAGTGGCACAATCTCTATTGTTTCAGAGTGA 2760 0.4663 MKKAREAQNESDTWLSAEATPSWVLYPSCLSQRLVWFHYHMLPNLSPSSPTFXDEEEGHVSLSLNQTPEKFHHAFSSLFTLTFSLLSPISILSPSSPFPISPNEAQTTSTQNPNPNPPSFMTISLFTFFSFIVFFSATPLTHALGSASTLAVIDDSATVCGIVAGESIRRIECYSRGQILPVTPNISFSSISGGRSYFCGLRSGNYSLLCWDSVSSNSSGPLQGKRIYSNFNVLLENLSVGDTQVCATVVGSGDVRCWRPNDIRTADQFVTLTSGYGFSCGILKNTSRVHCWGMRQPLVDQIVNGFGGMPMLSLVAGDSHVCGLNSTGFVVCGGSNSSGQLNVPQGGRPMEFSGLALGAEHCCAIRESNRSVVCWGGGGRFSESFTEGTSFELIVSGSNFTCGLVSGDFSVMCWGPGWVNNNSSAFNNPFELPLSPILPGPCVQSSCECGQYPQYQNLCSGSGTICRPCYPNISAPGLPPSTSPPPPLVSPPPSSRSKTLTRGLLAFAIVGSVGAFAGICTIIYCLWTGVCFGKKKVHNSVQPRINREGSSNNGGGIINSSSSPPSRSSTIRRQGSRIMRRQRSGTSSAKHPDRAEEFSLAELVAATNNFSLENKIGAGSFGVVYRGKLADGREVAIKRGEIGSKLKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKEERLLVYEYMKNGALHDHLHAKNNVEKSSSFLNSWKMRIKIALDASRGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGPDSDSDYRPAKAAGTVGYIDPEYYGLNVLTAKSDVYGFGIVLLELLTGKRAIFKHGENGGTPVSLADYAVPEIMAGELPKILDGRVGPPEMNEAEAVELVAYTAMYCVSLEGKDRPTMTDIVANLDRALSLCDSSHGSISSGTISIVSE 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1339 919 SUPERFAMILY Protein kinase-like (PK-like) 590 895 IPR011009 -
Mibi08g1339 919 Gene3D Phosphorylase Kinase; domain 1 571 690 - -
Mibi08g1339 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Mibi08g1339 919 Gene3D - 140 304 IPR009091 -
Mibi08g1339 919 Gene3D - 305 451 IPR009091 -
Mibi08g1339 919 SMART serkin_6 610 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1339 919 FunFam Serine/threonine-protein kinase-like protein CCR4 691 912 - -
Mibi08g1339 919 MobiDBLite consensus disorder prediction 543 592 - -
Mibi08g1339 919 SUPERFAMILY RCC1/BLIP-II 134 379 IPR009091 -
Mibi08g1339 919 ProSiteProfiles Protein kinase domain profile. 610 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1339 919 FunFam serine/threonine-protein kinase-like protein CCR1 579 690 - -
Mibi08g1339 919 Gene3D Transferase(Phosphotransferase) domain 1 691 908 - -
Mibi08g1339 919 Pfam Protein kinase domain 611 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1339 919 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 309 905 IPR044815 GO:0004674
Mibi08g1339 919 MobiDBLite consensus disorder prediction 543 573 - -
Mibi08g1339 919 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
Mibi08g1339 919 CDD STKc_IRAK 616 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1339 Mibi-ChrMibi08 29382025 29386324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1339 119 919 Receptor kinase-like Gene Family AT3G55950 60.457 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mibi08g1339 Pkinase 2.5e-43 CL0016