Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1313 ATGGTTGCTCACTTGGGAGACTTTGGATTAGCTAAGCTCCTTCATGAAGTTACAGGCTATTCTAACATAGATCAAACTTCTTCCTCAGCAGTTAAAGGAACCATTGGTTATATTCCTCCAGAGTATGCAGCAGGTGGACCAGTTACAATACAAGGGGATATCTATAGCTATGGGGTTCTATTGTTAGAGATGCTCACTGGAAAGAGGCCTAGAAATAGCATGTTCGGAGAAGATCTAAGCCTCCATAAGTTTTGTAAGTTAGCATTGTCAAAAAGATCAGTCATTGAGATAGTGGACTCGAATTTGCTCTTGGCATCCGAAAGAGACCACATCAAAATTCAAGAATCTTTTATCAGCTTTGCTAAGATTGGAGTGGCATGTTCAGTAGATTTGCCTAATGAACGGATGAGAATAAAAGATGTTTTCGTTGAATTGCTTGCGATTAGAAAGAGGTTATCCCCAACAAGTATCACCATTTCTAATGCATAA 489 0.3926 MVAHLGDFGLAKLLHEVTGYSNIDQTSSSAVKGTIGYIPPEYAAGGPVTIQGDIYSYGVLLLEMLTGKRPRNSMFGEDLSLHKFCKLALSKRSVIEIVDSNLLLASERDHIKIQESFISFAKIGVACSVDLPNERMRIKDVFVELLAIRKRLSPTSITISNA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1313 162 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 148 - -
Mibi08g1313 162 SUPERFAMILY Protein kinase-like (PK-like) 2 145 IPR011009 -
Mibi08g1313 162 Pfam Protein kinase domain 4 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g1313 162 Gene3D Transferase(Phosphotransferase) domain 1 1 158 - -
Mibi08g1313 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1313 Mibi-ChrMibi08 29119860 29120470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1313 1 158 Receptor kinase-like Gene Family AT3G47580 43.671 9.84e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi08g1313 Pkinase 6.8e-11 CL0016