Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1305 ATGGTGAAGAAACCCACAAAGGCCGAGAAGAAGATCGCCTATGATGCGAAATTGTGCCAGCTTCTGGAGGATTTCACACAGATCCTTGTGGTGGCTGCCGACAATGTCGGGTCCAATCAGCTTCAAAATATCAGGAAGGGACTGCGTGGTGACTCAGTGGTTCTCATGGGCAAGAACACCATGATGAAGCGTTCTGTTAGGATTCACTCTGAGAAAACAGGAAACAATGCCTTCCTCAACCTTATCCCTCTGCTTCAGGGCAATGTGGGGTTGATTTTCACTAAAGGAGACCTGAAGGAGGTTAGTGAGGAGGTTGCCAAGTACAAGGTTGGAGCTCCTGCCCGTGTTGGTTTGGTTGCTCCCATTGATGTCATTGTTCCTCCTGGCAATACAGGGCTTGATCCCTCTCAGACATCTTTCTTCCAGGTTCTCAATATTCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTTATTAAGAAGGGTGACAAGGTGGGCTCCTCAGAAGCTGCTCTGCTTGCAAAACTTGGGATCCGACCGTTCTCATATGGGCTGGTGGTCCTATCTGTGTATGATAACGGTTCAGTGTTCAGCCCTGAGGTCCTTGATCTTACTGAGGATGATCTTGTTGAGAAGTTCGCTTCTGGTGTTTCCATGATGACATCAGTTGCTTTGGCAACCTCTTACCCAACAATTGCCGCTGCGCCATCTATGTTCATCAATTTCTACAAAAACGTGTTGTCTGTTGCAGTGGAAACTACTTACTCTTACCCCGAGGCAGAGAAGGTTAAGGAGTACCTAGAGGATCCTAGCAAGTTTGCTGTCGCGGCTGCACCTGTTGCTGCTTCTGGTGCCGCCCCAGCTGCTGCAGCTGCAGAGGAGAAGAAAGAGGAGCCAGCTGAAGAATCTGATGAAGACCTAATAATAAACCTTTCACAAACTCTCCACACACAGACAGTTTTCATTTGCATTCCGCTTTCTCCCAAACCTTCGCTTCAGAGACGATTAGGGGTTAAAGAGACGGCGTGTATTTGCTGTCCGCCTTGA 1062 0.4831 MVKKPTKAEKKIAYDAKLCQLLEDFTQILVVAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSEKTGNNAFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFASGVSMMTSVALATSYPTIAAAPSMFINFYKNVLSVAVETTYSYPEAEKVKEYLEDPSKFAVAAAPVAASGAAPAAAAAEEKKEEPAEESDEDLIINLSQTLHTQTVFICIPLSPKPSLQRRLGVKETACICCPP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1305 353 Pfam 60s Acidic ribosomal protein 234 312 - -
Mibi08g1305 353 FunFam 60S acidic ribosomal protein P0 113 186 - -
Mibi08g1305 353 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 302 - -
Mibi08g1305 353 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Mibi08g1305 353 PIRSF L10E 1 318 IPR030670 GO:0042254
Mibi08g1305 353 CDD Ribosomal_P0_L10e 9 185 - -
Mibi08g1305 353 Pfam Ribosomal protein L10 7 108 IPR001790 -
Mibi08g1305 353 Gene3D - 114 185 IPR043164 -
Mibi08g1305 353 Gene3D - 6 209 IPR043141 -
Mibi08g1305 353 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1305 Mibi-ChrMibi08 28953112 28956938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1305 1 316 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 81.388 3.15e-180 500
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1305 08 28953112 28956938 Mibi08g1305 08 28953112 28956938 ECH