Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1300 ATGGAGGGGAAGGAACAGGATGTGTCGTTGGGGGCGAACAAGTTCCCGGAGAGGCAGCCCATAGGCACCGCGGCTCAGAGCCAAGACGACGGCAAGGACTACCAGGAGCCACCGCCGGCGCCACTCTTCGAACCCTCCGAGCTCACCTCATGGTCTTTTTACAGAGCTGGCATCGCCGAGTTCGTGGCCACTTTCCTCTTCCTCTACATCACCATATTGACCGTTATGGGAGTTAGTCGCTCCGATTCCAAGTGCAAAACCGTTGGAATCCAAGGCATCGCCTGGGCTTTTGGTGGCATGATCTTCGCCCTCGTTTACTGCACTGCTGGAATTTCAGGTGGTCACATAAATCCGGCGGTGACATTTGGGCTGTTCTTGGGGAGGAAATTGTCGTTGACAAGGGCCATATTCTACATAGTGATGCAGTGCTTGGGTGCTATCTGTGGTGCTGGTGTTGTTAAGGGTTTTGAGGGCAAGAAAGTGTACGGCGACATGGGTGGCGGAGTCAACTACGTCCACGATGGTTACACCAAAGGTGATGGCCTCGGTGCTGAGATTGTTGGTACCTTCATCCTTGTCTACACCGTCTTCTCCGCCACCGATGCCAAGCGTAGCGCCCGTGACTCCCACGTCCCCATTTTGGCACCATTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACCATCCCCATCACTGGAACCGGCATCAACCCGGCTCGTAGTCTCGGAGCAGCCATCATCTTCAACAAACACCTCGGCTGGCATGAACACTGGGTTTTCTGGGTGGGACCATTCATTGGAGCAGCACTGGCAGCACTGTACCACGTCGTGGTGATCAGGGCCATTCCATTCAAGTCCAAGTGA 870 0.5483 MEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVSRSDSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLGRKLSLTRAIFYIVMQCLGAICGAGVVKGFEGKKVYGDMGGGVNYVHDGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKHLGWHEHWVFWVGPFIGAALAALYHVVVIRAIPFKSK 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1300 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Mibi08g1300 289 Gene3D Glycerol uptake facilitator protein. 40 287 IPR023271 -
Mibi08g1300 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi08g1300 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi08g1300 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi08g1300 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi08g1300 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi08g1300 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi08g1300 289 MobiDBLite consensus disorder prediction 1 39 - -
Mibi08g1300 289 FunFam Probable aquaporin PIP1-2 40 289 - -
Mibi08g1300 289 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi08g1300 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 285 IPR034294 -
Mibi08g1300 289 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi08g1300 289 SUPERFAMILY Aquaporin-like 47 281 IPR023271 -
Mibi08g1300 289 TIGRFAM MIP: MIP family channel proteins 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi08g1300 Mibi-ChrMibi08 28891417 28892969 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1300 1 289 Major Intrinsic Protein MIP AT3G61430 84.083 4.92e-169 468
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1300 08 28891417 28892969 Mibi08g1300 08 28891417 28892969 CCT
Mibi08g1300 08 28891417 28892969 Mibi08g1300 08 28891417 28892969 ECH