Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1299 ATGGCGGCGAGCGAGCGCACCGTTTTGCAGTTCTCTTCCTCTTCCTCCTCCTCCTCCTCGCAGAGCTTATCTGCGAAGGTTCACCCTCTCGTTATCTTCAACATCTGCGATTGCTATGTCCGACGTCCCGACCAAGCGGAACGCGTCATCGGAACACTCCTTGGCTCTGTCTTGCCCGATGGAACCGTCGATATCCGTAATTCTTATGCTGTTCCCCACAATGAGTCTCTGGGACAGGTTGCTTTGGATATTGAGTACCACCGCAATATGTTGATTTCCCACCAAAAAGTGAATCCAAAGGAAGTCATAGTTGGCTGGTATTCAACTGGTCTTGGAGTGAATGGGGGTAGTGCACTAATCCATGAATTTTATTCTCGAGAAGTGCCCAATCCTGTACATTTGACAGTTGATACAGGATTCACCCTTGGAGAGGGAACCATTAAGGCTTATGTATCACACAATTTATCTCTTGGAGATTGGCAAATTGCTGCTCAGTTTCAAGAAATTCCGCTGGATCTTCGCATGGTTGAAGCTGAGCGTATTGGATTTGATACTCTGAAGGCAACCACTGTTGACAAAATCCCAAATGATTTGGAAGGGATGGAAACATCAATGGAACGCCTTCTAGCCTTGATTGATGACATCTACAAATATGTTGATGATGTTGTGGAAGGGCGTGTTGTGCCAGACAACAATGTTGGAAGGTTTATATCTAATGCTGTAGGTTCTCTTCCCAAATTGCCCCCTTCAGCTTTTGATAAGCTCGTGAACGATAGTTTGCAGGATCATTTGCTGTTGCTCTATTTATCAAGCATAACAAGGACACAACTAAGCCTGGCCGAAAAATTGAACACAGCTGCTCAGATCCTGTGA 873 0.4559 MAASERTVLQFSSSSSSSSSQSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYAVPHNESLGQVALDIEYHRNMLISHQKVNPKEVIVGWYSTGLGVNGGSALIHEFYSREVPNPVHLTVDTGFTLGEGTIKAYVSHNLSLGDWQIAAQFQEIPLDLRMVEAERIGFDTLKATTVDKIPNDLEGMETSMERLLALIDDIYKYVDDVVEGRVVPDNNVGRFISNAVGSLPKLPPSAFDKLVNDSLQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1299 290 Pfam Maintenance of mitochondrial structure and function 177 283 IPR024969 -
Mibi08g1299 290 Gene3D Cytidine Deaminase, domain 2 11 191 - -
Mibi08g1299 290 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 13 287 - -
Mibi08g1299 290 SMART pad1_6 24 155 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi08g1299 290 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 23 286 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mibi08g1299 290 FunFam Eukaryotic translation initiation factor 3 subunit F 9 191 - -
Mibi08g1299 290 ProSiteProfiles MPN domain profile. 25 156 IPR037518 -
Mibi08g1299 290 CDD MPN_eIF3f 26 283 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mibi08g1299 290 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 23 127 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1299 Mibi-ChrMibi08 28879780 28882987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1299 2 290 Eukaryotic Initiation Factors Gene Family AT2G39990 77.663 1.99e-162 451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1299 08 28879780 28882987 Mibi08g1299 08 28879780 28882987 ECH