Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1276 ATGAAGATTCTCACCCTGGGTTCTCAAAATGGTGGACACTGTCACACTGACAAGTCTCATGTTGTTGTTGATATTATAGACAATGACAATGACAATGACAATGGTGGTCGGCGTAGCAGCTCCGTCGGCGGCGGGAATCCAGACACTTCCGACAGTGTAGATAACGATCGAAAATCCTCCGACGAAGCCGAGATTGTTGGGGTGATGGAAAAAGAGAAGGGATCCCCTGCATCGGGGTGTTCGGTGGAGGTGGATTTGGGGGATGTGGTGGCTGAAACTAAGGTACATTTGAGTGAGGAAGTGAAGAGGGATTGTAGGATTTGCCATCTTAGTATGGATATGACTAATCATGAATCTGGGAGCATTGAGCTTGGTTGTTCTTGTAAGGACGATTTGGTTGCTGCTCACAAGCAATGTGCTGAGGCTTGGTTCAAGATCAAGGGAAACAAAACCTGTGAAATCTGTGGATCAATTGCACGCAATGTAACTGGAGTTTTTGAAGTTGAAAATGTTGAACAATGGACCGAGTCAAACGATGCCAGCATGGCAGCCCCAAGTGGACCTGTGTCCCACGCTGAAAATAGAAGCTTCTGGAGGGGTCACAGATTCTTAAATTTCTTACTAGCCTGTATGGTCTTTGCCTTTGTCATATCATGGCTTTTTCACTTCAATGTACCCTCATGA 684 0.4591 MKILTLGSQNGGHCHTDKSHVVVDIIDNDNDNDNGGRRSSSVGGGNPDTSDSVDNDRKSSDEAEIVGVMEKEKGSPASGCSVEVDLGDVVAETKVHLSEEVKRDCRICHLSMDMTNHESGSIELGCSCKDDLVAAHKQCAEAWFKIKGNKTCEICGSIARNVTGVFEVENVEQWTESNDASMAAPSGPVSHAENRSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1276 227 MobiDBLite consensus disorder prediction 26 61 - -
Mibi08g1276 227 ProSiteProfiles Zinc finger RING-CH-type profile. 97 162 IPR011016 GO:0008270
Mibi08g1276 227 PANTHER ZINC FINGER, RING-CH-TYPE 28 226 - -
Mibi08g1276 227 MobiDBLite consensus disorder prediction 35 50 - -
Mibi08g1276 227 SUPERFAMILY RING/U-box 100 158 - -
Mibi08g1276 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 164 IPR013083 -
Mibi08g1276 227 SMART ringv_2 104 156 IPR011016 GO:0008270
Mibi08g1276 227 Pfam RING-variant domain 105 155 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1276 Mibi-ChrMibi08 28559414 28561743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1276 48 227 C3H Transcription Factor Family AT5G05830 60.638 2.17e-65 199