Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1249 ATGGCTCCTTCAGAAGTCAATCATCTCTCTCACCCTTGCATATATGGGGATTTTTCTTCCTCTTACTCTGAGAGGAAGTCTGGATTTATGAAATGGTTTAGTAAGCTTTTCAAAGGTGGGTCCAATCGAGGAAGAGGAGGTCGTCATCTCCAGCAGCCTACTGAGGAAAATATGGTGCGACGTAATCCAAATAGATCATTGGATGACCGTTCTAGAGCTCAGAAGGAGAAAGAGGATCTAGACCATGCGATTGCACTTTCTTTAGCTGAGGATTTGAAGAGACCACATGGATATAGATGGCGTGGAGGCATTGATGAAGATTATGCGAGTGAATTTCAGGACCAGAACTCATCTGCACATCCTCCATATACCCGTGCAACATATGGGGATATGAGGGTATGTGGTGCGTGCAACCGGGATATAGCCTATGGGAATTGTTTAAGATGCAATAATACTTTTTTTCATCCAGGGTGCTTTCGCTGTCACTCTTGTCGTTACCCCATTACTGAGCACGAGTTTTCTTTATCAGGGAAGCATCCGTATCACAAGTCCTGTTTCAAAGAGTTGACTCACCCAAAATGTGAAGTTTGCTTCCAATTTATTCCCATAAATGCTGCTGGTTTGATCGAGTATAGATGTCACCCATTTTGGTCCCAAAAATATTGTCCAGCTCATGAATATGACGATACAGCTCGCTGCTGTAGTTGTGAAAGATTAGAGTCTTTGAATGCAAAATACTATAGTTTGGAAGATGGGCGTAGTTTATGTTTAGAGTGCATGGAGTCAGCTATTATGGACACTGGAGATTGTCAACCTCTTTACCATTCAATTAGAGATTATTATGAAGGAATGAATATGAAAATAGACCAACAAATTCCTATGCTTCTGGTTGAGAGGCAAGCACTCAATGAAGCTATTGTTGGTGATAAAAGTGGTTACCATCATATGCCAGAGACAAGAGGCTTGTGCCTTTCGGAAGAGTTGACTGTCACCAGTGTTCATCGAAGGCCAAGAATTGGAGGCCACCGGCTAATTGGAATGAGAACCCAACCTCAAAAGCTTACAAGAAAATGTGAAGTTACAGCCATTCTTGTTCTCTACGGTCTTCCAAGGTTGCTCACAGGCGCTATCCTTGCCCATGAGTTAATGCACGGCTGGTTACGCCTTAAAGGTTACCGTAATCTTAATCCTGAAGTAGAAGAAGGAATCTGTCAGGTTCTGTCTTATATGTGGCTTGAGTCAGAAGTAATGCCTGGCCTTAAAAGCATGCCTTCAACTTCAGCAGCTTCTTCTTCCTCCTCCTCCTCTTCCTACTACTACCCATCATCATCACCATCATCTAAGAAAGGAGCCAAATCTGAAGTTGAAAATAAACTGGGTCAGTTTTTCATGAATCAGATTGCCAATGATTCTTCTCCAGCATATGGGGGTGGCTTTAGAGCTGCTAATGAGGCTGTGAACAAATATGGTTTACGTAGAACTCTTGAACATATTCGTTTGACTGGTAGTTTCCCACTGTAA 1521 0.4247 MAPSEVNHLSHPCIYGDFSSSYSERKSGFMKWFSKLFKGGSNRGRGGRHLQQPTEENMVRRNPNRSLDDRSRAQKEKEDLDHAIALSLAEDLKRPHGYRWRGGIDEDYASEFQDQNSSAHPPYTRATYGDMRVCGACNRDIAYGNCLRCNNTFFHPGCFRCHSCRYPITEHEFSLSGKHPYHKSCFKELTHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPAHEYDDTARCCSCERLESLNAKYYSLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMNMKIDQQIPMLLVERQALNEAIVGDKSGYHHMPETRGLCLSEELTVTSVHRRPRIGGHRLIGMRTQPQKLTRKCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPGLKSMPSTSAASSSSSSSSYYYPSSSPSSKKGAKSEVENKLGQFFMNQIANDSSPAYGGGFRAANEAVNKYGLRRTLEHIRLTGSFPL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1249 506 PANTHER PROTEIN DA1-RELATED 2 32 505 IPR045218 -
Mibi08g1249 506 Gene3D Cysteine Rich Protein 126 205 - -
Mibi08g1249 506 MobiDBLite consensus disorder prediction 61 78 - -
Mibi08g1249 506 SMART lim_4 133 185 IPR001781 -
Mibi08g1249 506 FunFam Protein DA1-related 2 122 187 - -
Mibi08g1249 506 CDD LIM_DA1 134 186 - -
Mibi08g1249 506 MobiDBLite consensus disorder prediction 422 450 - -
Mibi08g1249 506 ProSitePatterns LIM zinc-binding domain signature. 134 168 IPR001781 -
Mibi08g1249 506 MobiDBLite consensus disorder prediction 43 78 - -
Mibi08g1249 506 ProSiteProfiles LIM domain profile. 132 192 IPR001781 -
Mibi08g1249 506 Pfam Protein DA1 283 501 IPR022087 -
Mibi08g1249 506 MobiDBLite consensus disorder prediction 422 451 - -
Mibi08g1249 506 Pfam LIM domain 134 187 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1249 Mibi-ChrMibi08 28146087 28150714 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi08g1249 DA1-like 1.7e-100 CL0126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1249 08 28146087 28150714 Mibi08g1249 08 28146087 28150714 CCT
Mibi08g1249 08 28146087 28150714 Mibi08g1249 08 28146087 28150714 ECH