Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1244 ATGTTCACAAAGCAGAGAAGGCACGAAGCCACGGCCCACGAACAGAGAGAGAAGGCGAAGGCGGAACAGCGCCGGAGAGAGAGGAGCCGAGGGCGCGACGCGAGGAAGAGGAAGAAAAAGAACGAAGGAGAAGTGGGACTCACAGATGAATCTCATTATAGGAAAAGCAAGAGGAATATTACAATGAAGGCTTTGATTCTAGTTGGAGGTTTTGGAACAAGACTGAGGCCATTGACACTCAGTGTCCCCAAGCCTCTTGTTGATTTTGCCAACAAACCCATGATCCTGCATCAGATAGAGGCTCTTAAGTCTATTGGAGTTGATGAAGTGGTATTAGCAATCAATTACCAACCAGAGGTGATGTTGAATTTCTTGAAGGAATTTGAGACAAAACTAGGCATCAAGATCACGTGTTCACAAGAAACAGAACCACTGGGTACAGCAGGTCCTCTAGCTCTTGCCAGGGATAAGCTGATAGATGGCTCTGGAGAGCCTTTTTTTGTTCTTAACAGTGATGTTATCAGTGAGTACCCACTTAAGGAGATGGTTCAATTCCATAAATCCCATGGAGGAGAAGCATCCATAATGGTGACAAAGGTCGATGAACCATCAAAGTATGGTGTGGTTGTTATGGAGGAGAACACGGGGAAGGTTGAGAAATTTGTGGAAAAGCCCAAGTTGTTTGTTGGTAACAAAATCAATGCTGGTATTTACTTACTGAACCCCTCAGTTTTGGATCGTATTGAGCTAAGGCCCACATCTATAGAAAAAGAGGTATTTCCAAAGATTGCAGTAGAGCAAAAACTATTTGCCATGGTCCTTCCTGGGTTTTGGATGGATATTGGACAGCCTAGGGACTACATTACTGGACTGAGGCTCTATCTGGATTCACTAAAGAAAAAATCTTCTTCTAAGTTGGCCACTGGTCCTCATATTGTGGGGAATGTCATAGTGGATGAGACCGCCAAAATTGGTGAAGGATGTCTCATTGGACCTGATGTGGCTATTGGTCCTGGCTGCATAGTTGAGTCAGGTGTTCGTCTCTCCCGCTGCACTGTAATGCGAGGAGTCCGGATCAAGAGACATGCTTGCATTTCCAGCAGTATTATTGGGTGGCATTCCACTGTAGGTCAATGGGCTCGTGTGGAGAACATGACTATCCTCGGAGAAGATGTCCATGTGTGTGATGAGATATACAGCAATGGTGGTGTGGTTCTGCCCCACAAGGAGATCAAGACCAGCATTTGGAAACCAGAGATAGTTATGTGA 1269 0.4539 MFTKQRRHEATAHEQREKAKAEQRRRERSRGRDARKRKKKNEGEVGLTDESHYRKSKRNITMKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKSIGVDEVVLAINYQPEVMLNFLKEFETKLGIKITCSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVISEYPLKEMVQFHKSHGGEASIMVTKVDEPSKYGVVVMEENTGKVEKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAVEQKLFAMVLPGFWMDIGQPRDYITGLRLYLDSLKKKSSSKLATGPHIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKRHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKTSIWKPEIVM 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1244 422 MobiDBLite consensus disorder prediction 1 29 - -
Mibi08g1244 422 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 61 294 IPR029044 -
Mibi08g1244 422 SUPERFAMILY Nucleotide-diphospho-sugar transferases 62 373 IPR029044 -
Mibi08g1244 422 MobiDBLite consensus disorder prediction 1 50 - -
Mibi08g1244 422 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 62 421 - -
Mibi08g1244 422 Pfam Bacterial transferase hexapeptide (six repeats) 322 356 IPR001451 -
Mibi08g1244 422 FunFam mannose-1-phosphate guanyltransferase beta 62 293 - -
Mibi08g1244 422 Gene3D Hexapeptide repeat proteins 296 416 - -
Mibi08g1244 422 CDD M1P_guanylylT_B_like_N 62 295 IPR045233 GO:0004475|GO:0005525|GO:0009298
Mibi08g1244 422 Pfam Nucleotidyl transferase 63 290 IPR005835 GO:0009058|GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1244 Mibi-ChrMibi08 28091269 28097196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1244 62 208 Eukaryotic Initiation Factors Gene Family AT4G18300 24.516 2.24e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1244 08 28091269 28097196 Mibi08g1244 08 28091269 28097196 CCT
Mibi08g1244 08 28091269 28097196 Mibi08g1244 08 28091269 28097196 ECH