Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1237 ATGGCTGGGATTTGCTGTGGTGTTGTTGGGGAAGGTGAGACTCCGACTCCGATTGAGCCGGGAAGGGTTTCACGGCGCCGGAGGTTGGAAATGATGCCGTTGAAGCTTATGGCTGACATGGCTGTGCCGGTGACTGAGGCATGTGGCTTCAAGCGACAAAAGCTGGATCTCTCTACTAGAGATTGTGAAAACGCGGTTGAGAATTGTGAATCTAGTGATGTTAACAACAAGGAAGATGAACTGAAAAAAGCGGACGATGCTGCTGCATCTTCTTTGAATTGTACTGCTGTAAAAGAGTGTGATGATAATGATGATGAGGATGTTCGTGAGTGTCCTAAGTTTGGTGTTACTTCTGTTTGTGGTAGAAGGAGGGATATGGAAGATGCGGTTTCAGTTCGTCCTTCGTTTTGTCTAGAAGACGATCAAAATCGGAAGGATTTTCACTATTTTGGCGTGTTTGACGGCCATGGTTGCTCGCATGTAGCGACGATCTGTAAGGATAGGTTGCATGAAATTGTGAAGGAAGAGGTTGTTGTTGCAGCAAGAGAAGAAGATTTTGAATGGAAACCGACGATGGAACAGAGTTTTGCTAGAATGGACGAAGAGGTTCAGAACTGGAGCCAGACTAACCAGAACTCAACTTGCCGGTGCGAACTTCAAACACCTCACTGCGACGCCGTCGGATCCACCGCCGTCGTCGCCGTCGTCACGCCGGAAAAGATCATCGTCTCCAACTGCGGCGACTCACGCGCCGTCCTCTGCCGTAACGGCGTCGCCGTCCCCCTCTCGTCCGATCACAAGCCTGATCGACCTGATGAGTTGCTCCGAGTTCAAGCGGCCGGTGGACGAGTCATTTACTGGGATGGTCCTAGGGTTCTCGGAGTTTTAGCTATGTCCAGAGCAATAGGTGACAATTATCTGAAGCCGTACGTCATATCGGAGCCGGAGGTGACGGTGACGGAGCGAACCGATGAGGACGAGTGTTTGATTCTTGCGAGTGATGGATTGTGGGATGTGGTGTCGAACGACACAGCGTGTGGGGTTGTGCGGATGTGCCTGAAGGTGCAGAAACCGCCGTCGCCACCGGGATCGCCGGGGAGCGACATGGCGGTGTGTTCGGCGGCGGATGGGTCGGATAAGGCGTGTTCGGATGCGTCGATTTTGCTGACTAAGCTAGCTTTGGCTCGGCATAGTACTGACAATGTGAGCGTGGTGGTGGTGGATTTGAGGAGATGTAAGTCCGATGAGGAGAAGACCAATAATTGA 1266 0.5174 MAGICCGVVGEGETPTPIEPGRVSRRRRLEMMPLKLMADMAVPVTEACGFKRQKLDLSTRDCENAVENCESSDVNNKEDELKKADDAAASSLNCTAVKECDDNDDEDVRECPKFGVTSVCGRRRDMEDAVSVRPSFCLEDDQNRKDFHYFGVFDGHGCSHVATICKDRLHEIVKEEVVVAAREEDFEWKPTMEQSFARMDEEVQNWSQTNQNSTCRCELQTPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDTACGVVRMCLKVQKPPSPPGSPGSDMAVCSAADGSDKACSDASILLTKLALARHSTDNVSVVVVDLRRCKSDEEKTNN 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1237 421 Pfam Protein phosphatase 2C 114 381 IPR001932 -
Mibi08g1237 421 SMART PP2C_4 101 407 IPR001932 -
Mibi08g1237 421 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Mibi08g1237 421 ProSiteProfiles PPM-type phosphatase domain profile. 113 409 IPR001932 -
Mibi08g1237 421 SUPERFAMILY PP2C-like 113 410 IPR036457 -
Mibi08g1237 421 Gene3D - 108 417 IPR036457 -
Mibi08g1237 421 FunFam Protein phosphatase 2C 37 108 416 - -
Mibi08g1237 421 PANTHER PROTEIN PHOSPHATASE 86 409 - -
Mibi08g1237 421 CDD PP2Cc 113 409 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1237 Mibi-ChrMibi08 28016799 28018388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1237 112 411 PP2C-type Phosphatase Gene Family AT1G07430 65.312 7.94e-145 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1237 08 28016799 28018388 Mibi08g1237 08 28016799 28018388 CCT
Mibi08g1237 08 28016799 28018388 Mibi08g1237 08 28016799 28018388 ECH