Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1231 ATGGCGAATCGATGGTGGGCTGGGAACGTAGCAATGAGACCGAAAGATCCCTTATTGTCATCTCCATCGCTTCATCTGAGAAACCCAGAAGACGAACATGGCGGCGGCGGCGGCGGACCGAGTCGACTCGGTCCGAAGCGAGAGCAAGACTTCCTGGAAAACACCAACACCTCAACCAATAGCAGCAATAGCAACACAAACCCCGAAGACGGGAACGACGAAAACCGCAACGTCACCAACAACGACGATCAAAACCCCGGCGCTACGGACCCCGGAAGTAGCGGCGGGAGACGCCCCCGGGGCCGCCCGCCGGGGTCGAAGAACAAGGCAAAGGCGCCGGTGGTGGTGACGAAGGAGAGCCCCAACGCGCTGCGGAGCCACGTGTTGGAGATCTCCAGCGGCAGCGACGTCGCCGAGAGCCTCGCGAATTTCGCGAACCGCCGCCACCGCGGCGTGTCGGTGCTAAGCGGTAGCGGCATTGTCGCCAATGTCACCCTCCGGCACCCGTCGGCGCCGGGCGGGGTGATCACATTGAACGGGAGGTTCGAGATTTTGTCGCTGTCCGGATCGTTCTTGCCGGCCCCGTCGCCGCCCGGGGCGACCGGTCTGACCGTGTATTTGGCGGGCGGGCAAGGGCAGGTTGTTGGTGGGAATGTGGTGGGTTCATTGGTGGCATCAGGGCCAGTGTTGGTAATTGCAGCCACATTTGCTAATGCTACTTATGAGAGGTTGCCATTAGAAGAAAATGAGCCATCTGGGGAAGAGGTTGATGTACAACAACAACAACAACAACAAGCACAACAACAACATCAACAGCAATCAACAACTTCTGGGCCATCAGCTTCATCACAAGGAATGAATGAACAAGTATCAATGCCTATGTTCAATAACATGCCTCCTAATTTGCTTCCACCGAGTAATGATCACATGCCTCATGATTTGTTCTGGGGGCCACCTGCTCGCCAGCCTCCTCCTTACTGA 981 0.5719 MANRWWAGNVAMRPKDPLLSSPSLHLRNPEDEHGGGGGGPSRLGPKREQDFLENTNTSTNSSNSNTNPEDGNDENRNVTNNDDQNPGATDPGSSGGRRPRGRPPGSKNKAKAPVVVTKESPNALRSHVLEISSGSDVAESLANFANRRHRGVSVLSGSGIVANVTLRHPSAPGGVITLNGRFEILSLSGSFLPAPSPPGATGLTVYLAGGQGQVVGGNVVGSLVASGPVLVIAATFANATYERLPLEENEPSGEEVDVQQQQQQQAQQQHQQQSTTSGPSASSQGMNEQVSMPMFNNMPPNLLPPSNDHMPHDLFWGPPARQPPPY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1231 326 Gene3D - 124 266 - -
Mibi08g1231 326 ProSiteProfiles PPC domain profile profile. 121 257 IPR005175 -
Mibi08g1231 326 MobiDBLite consensus disorder prediction 255 296 - -
Mibi08g1231 326 MobiDBLite consensus disorder prediction 50 91 - -
Mibi08g1231 326 MobiDBLite consensus disorder prediction 1 114 - -
Mibi08g1231 326 FunFam AT-hook motif nuclear-localized protein 124 251 - -
Mibi08g1231 326 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 237 IPR005175 -
Mibi08g1231 326 CDD DUF296 125 208 IPR005175 -
Mibi08g1231 326 SUPERFAMILY AF0104/ALDC/Ptd012-like 121 249 - -
Mibi08g1231 326 MobiDBLite consensus disorder prediction 248 326 - -
Mibi08g1231 326 PIRSF ESCAROLA 42 326 IPR014476 GO:0003680
Mibi08g1231 326 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 60 317 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1231 Mibi-ChrMibi08 27908289 27909269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1231 1 326 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 50.000 6.58e-74 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1231 08 27908289 27909269 Mibi08g1231 08 27908289 27909269 CCT
Mibi08g1231 08 27908289 27909269 Mibi08g1231 08 27908289 27909269 ECH